Latest Research in Molecular Dynamics and Transcriptomics

1,202 research papers · 0.1 average citations · 2026 median publication year

Top Research Topics in Molecular Dynamics and Transcriptomics

Highest-Cited Papers

  1. The Tri-Layer Genetic Code The Fundamental Equation of Biological Information - DNA (5 citations)
  2. Cohesin acts as a transcriptional gatekeeper by restraining pause–release to promote processive elongation (4 citations)
  3. Cohesin prevents local mixing of condensed euchromatic domains in living human cells (7 citations)
  4. Modulation of the cytoskeleton for cancer therapy (8 citations)
  5. End processing in NHEJ by Polymerase λ and PNKP is coordinated during short-range synapsis (3 citations)
  6. Submolecular video-imaging of the Smc5/6 complex topologically bound to DNA (2 citations)
  7. On the use of variational autoencoders for biomedical data integration (1 citations)
  8. Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering (3 citations)
  9. STcompare: comparative spatial transcriptomics data analysis of structurally matched tissues to characterize differentially spatially patterned genes (2 citations)
  10. Photocatalytic proximity labeling for the identification of G-quadruplex DNA-interacting proteins (3 citations)
  11. Unraveling single-molecule reactions via multiplexed in-situ DNA sequencing (2 citations)
  12. The human cytomegalovirus vGPCR UL33 is essential for efficient lytic replication in epithelial cells (2 citations)
  13. Molecular basis of nick ligation in the nucleosome by DNA Ligase IIIα (2 citations)
  14. Reconstitution of multistep recruitment of ULK1 to membranes in autophagy (1 citations)
  15. Conformational asymmetry of replicated human chromosomes (3 citations)
  16. TM184C is a GPCR-like regulator of intercellular exchange and autophagy (1 citations)
  17. SMURF2 inhibits autophagic control of Mycobacterium tuberculosis in macrophages (1 citations)
  18. Live dynamics of induced cell-cell fusion between mitotic and interphasic cells (2 citations)
  19. SPEF1 mediates assembly of central pair microtubule complexes in cilia of Tetrahymena (1 citations)
  20. Truthful visualizations for mass spectrometry imaging enable high-spatial-resolution interactive m/z mapping and exploration (2 citations)

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L1 Region - - 2026 Sep Q3

Molecular Dynamics and Transcriptomics

1,202 papers
0.1 avg cites

Top Topics (10)

Single-cell and spatial transcriptomics102
Genomics and Chromatin Dynamics48
Extracellular vesicles in disease46
Microtubule and mitosis dynamics38
Cellular Mechanics and Interactions31
DNA Repair Mechanisms29
Protein Degradation and Inhibitors26
RNA Research and Splicing24
Machine Learning24
interferon and immune responses23

Top Publications (20)

1.The Tri-Layer Genetic Code The Fundamental Equation of Biological Information - DNA5c2.Cohesin acts as a transcriptional gatekeeper by restraining pause–release to promote processive elongation4c3.Cohesin prevents local mixing of condensed euchromatic domains in living human cells7c4.Modulation of the cytoskeleton for cancer therapy8c5.End processing in NHEJ by Polymerase λ and PNKP is coordinated during short-range synapsis3c6.Submolecular video-imaging of the Smc5/6 complex topologically bound to DNA2c7.On the use of variational autoencoders for biomedical data integration1c8.Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering3c9.STcompare: comparative spatial transcriptomics data analysis of structurally matched tissues to characterize differentially spatially patterned genes2c10.Photocatalytic proximity labeling for the identification of G-quadruplex DNA-interacting proteins3c11.Unraveling single-molecule reactions via multiplexed in-situ DNA sequencing2c12.The human cytomegalovirus vGPCR UL33 is essential for efficient lytic replication in epithelial cells2c13.Molecular basis of nick ligation in the nucleosome by DNA Ligase IIIα2c14.Reconstitution of multistep recruitment of ULK1 to membranes in autophagy1c15.Conformational asymmetry of replicated human chromosomes3c16.TM184C is a GPCR-like regulator of intercellular exchange and autophagy1c17.SMURF2 inhibits autophagic control of Mycobacterium tuberculosis in macrophages1c18.Live dynamics of induced cell-cell fusion between mitotic and interphasic cells2c19.SPEF1 mediates assembly of central pair microtubule complexes in cilia of Tetrahymena1c20.Truthful visualizations for mass spectrometry imaging enable high-spatial-resolution interactive m/z mapping and exploration2c

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