Latest Research in Single-cell and spatial transcriptomics
22 research papers · 2026 median publication year
Top Research Topics in Single-cell and spatial transcriptomics
- Single-cell and spatial transcriptomics — 7 papers
- Genomics and Chromatin Dynamics — 4 papers
- RNA Research and Splicing — 2 papers
- Methodology — 1 papers
- DNA Repair Mechanisms — 1 papers
- Congenital heart defects research — 1 papers
- Microtubule and mitosis dynamics — 1 papers
- Genomic variations and chromosomal abnormalities — 1 papers
- Cell Image Analysis Techniques — 1 papers
- Quantitative Methods — 1 papers
Highest-Cited Papers
- N4BP1 uses tandem KH domains to associate with EDC4 and mRNA decapping factors in P-bodies
- Causal Path Analysis from Perturbational and Population-Scale Single-Cell Data with Multiscale Confounding and Measurement Error
- RNA velocity inference based on graph transformer
- ISWI/CHRAC orchestrates sequential chromatin-remodeling activities by mobilizing DNA polymerase ε for homologous recombination
- Uncovering minimal control of cell fate by natural dynamics
- dcHiChIP: A comprehensive Nextflow-based pipeline for multiscale analysis of chromatin architecture from HiChIP data
- fp-tools: A Reproducible Platform for ATAC-seq Footprinting and Regulatory Motif Analysis
- The CENP-A chaperone complex spatially organizes centromeres
- Interpretable machine learning enables de novo mapping of cell type-specific RNA splicing regulation from scRNA-seq data
- Systematic benchmarking of ambient RNA decontamination tools to advance precision in single-cell transcriptomic analysis
- CTCF aligns single-cell TAD-like domain boundaries and stabilizes long-range active chromatin clusters
- SHISMA: SH ape-driven I nference of significant celltype-specific S ubnetworks from ti M e series single-cell tr A nscriptomics
- sortscore: Sort-seq MAVE scoring and visualization using Python
- FusionX: Automated, Standardized quantification of cell-to-cell fusion across diverse systems
- Transient topological entanglement of chromatin fiber in human cells during interphase
- Operationalizing open-ended biological discovery across single-cell representations
- mmVelo: A deep generative model for estimating cell state-dependent dynamics across multiple modalities
- SCENE: A Framework for Single-cell Gene Co-expression Network Analysis Across Cell Types and Conditions
- Identification of differential topologically associating domains from low sequencing depth and pseudo-bulk chromatin contact maps
- Combining BulkFormer and TabPFN to predict post-transplant function from kidney biopsies during normothermic machine perfusion or cold storage