Latest Research in Protein Folding Dynamics

Top Research Topics in Protein Folding Dynamics

• Protein Structure and Dynamics — 15 papers
• Machine Learning in Bioinformatics — 10 papers
• Bioinformatics and Genomic Networks — 7 papers
• Machine Learning — 4 papers
• Artificial Intelligence — 4 papers
• Quantitative Methods — 4 papers
• Crystallography and molecular interactions — 2 papers
• RNA Research and Splicing — 2 papers
• Biomolecules — 2 papers
• Genomics and Rare Diseases — 2 papers

Highest-Cited Papers

1. In extracto cryo-EM reveals eEF2 as a major hibernation factor on 60S and 80S particles (4 citations)
2. A machine learning method for calculating highly localized protein stabilities (1 citations)
3. Hydrogen Bonds Determining the Conformation of Isolated Amino Acid Residues in Proteins: Re‐Examination of the Fully Extended C5 Structures
4. Analysis of structural errors in the AlphaFold DB v4 and v6
5. Green fluorescent protein and its fusion constructs induce intracellular puncta under defined conditions
6. Several multiple sequence alignment-perturbing methods enhance AlphaFold3 sampling of alternative protein states
7. Examining Protein Residue-Level Stability Using Theory and Experiment
8. Developing SCL2205 : A Protein Sequence-based Spatial Modelling Dataset for the Protein Language Model Frontier
9. Probing the pH- and Voltage-Driven Intramolecular Folding Dynamics of the c -MycC52 Promoter i -Motif at the Single-Molecule Level
10. ESpma : A method for assessing biological/non‐biological interfaces using point‐clouds‐based structural features and protein language models
11. Per-residue optimisation of protein structures: rapid alternative to local optimisation with constrained alpha carbons
12. A simplified modelling protocol for synthetic biology
13. Conformational ensembles of the disordered 4E ‐ BP2 : eIF4E complex restrained by smFRET experiments
14. A Multistrategy AI‐Assisted Consensus Screening Pipeline for Discovery of Candidate p53 Monomer Binders
15. Crystal structure of human NIF3 ‐like protein reveals dynamic hexameric assembly with a single divalent metal binding site
16. Binding of Anthracyclines Within DNA–Topoisomerase ΙΙ Cleavage Complexes: Thermodynamics and Interactions
17. Graph Matching Relaxations and Amortization for Supervised Graph Prediction
18. Synthesizing State-of-the-Art Structure Predictions from Soup of Co-folding Models
19. Structure-Aware Masking for Protein Representation Learning
20. Task- and dataset-specific information in protein language models

Sub-Regions

• RNA and protein synthesis mechanisms — 26 papers
• Bioinformatics and Genomic Networks — 17 papers
• Artificial Intelligence — 13 papers
• Protein Structure and Dynamics — 12 papers
• Machine Learning in Bioinformatics — 9 papers
• Cancer therapeutics and mechanisms — 7 papers