Free, user-friendly web-platform for integrative species delimitation analyses, inc. video tutorials
This document introduces the Spart explorer web platform developed under Task 6.3. This tool enables integrative species delimitation analyses through a free, user-friendly web platform. Species hypothesis can be inferred from a DNA alignment in FASTA format using ASAP or ABGD methods. Limes then compares the different partitions qualitatively and associates them with a score independently of the method used. Last but not least, Spart explorer lets you graphically visualise results, whether generated or imported from pre-existing data. In this document, we present several screenshots showing the graphical user interface and the various options available, as well as a link to a video which has the same purpose. We conclude by mentioning the limitations and prospects for improvement of this web platform.
Authors
- Nicolas Puillandre (ORCID: https://orcid.org/0000-0002-9797-0892)
- Tony Robillard (ORCID: https://orcid.org/0000-0002-2177-9549)
- Teddy Bruy
- Aurélien Miralles (ORCID: https://orcid.org/0000-0002-2538-7710)
- Magalie Castelin (ORCID: https://orcid.org/0000-0002-9984-2122)
- Julie Bouché
Institutions
- Centre National de la Recherche Scientifique (FR)
- École Pratique des Hautes Études (FR)
- Muséum national d'Histoire naturelle (FR)
Publication Details
- Published
- 2026-11-11
- DOI
- https://doi.org/10.3897/arphapreprints.e222790
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- preprint