KAT6 and KAT7 actively maintain mitotic chromatin composition and acetylation to preserve developmental competence

Mitotic bookmarking enables transmission of regulatory information across cell division, yet how active chromatin states are molecularly preserved during mitosis and how they contribute to postmitotic cell fate decisions remain unresolved. Here, we demonstrate that the acetyltransferases KAT6 and KAT7 remain chromatin-bound and catalytically active throughout mitosis in mouse and human pluripotent stem cells. Acute KAT6/7 depletion disrupts mitotic histone acetylation and the retention of multiple chromatin regulators with minimal effects on chromatin accessibility. Mechanistically, KAT6/7 bookmark both self renewal and developmental gene loci, where they are required for post-mitotic transcriptional reactivation and priming of lineage-specific programs. Consistently, genes impaired during postmitotic reactivation also fail to activate during neuronal differentiation upon continuous KAT6/7 perturbation, compromising the establishment of the neuronal program and identity. Altogether, our findings identify KAT6 and KAT7 as a cooperative mitotic chromatin maintenance system that couples active histone acetylation to preservation of chromatin composition, transcriptional memory, and developmental competence across cell division, extending the bookmarking function beyond transcriptional memory. These findings also provide a new framework for understanding KAT6/7 function in neurodevelopmental disorders and cancer.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-11-10
DOI
https://doi.org/10.64898/2026.11.07.765049
Primary Topic
Genomics and Chromatin Dynamics
Type
preprint
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preprint

KAT6 and KAT7 actively maintain mitotic chromatin composition and acetylation to preserve developmental competence

UkJin Lee, Effie Apostolou, Urko del Castillo, Matthias Stadtfeld et al.
bioRxiv (Cold Spring Harbor Laboratory)
Genomics and Chromatin Dynamics
preprint

KAT6 and KAT7 actively maintain mitotic chromatin composition and acetylation to preserve developmental competence

UkJin Lee, Effie Apostolou, Urko del Castillo, Matthias Stadtfeld, Simone Sidoli, Abigail Lidoski, Haiyuan Yu, Paraskevi Giannakakou, Stephanie Stransky, Alejandra Laguillo-Diego, Xiao Liu, Jin Joo Kang, Kritika Kasliwal, Bryce J. Katch, Spencer Kaufman
preprint en

Abstract

Mitotic bookmarking enables transmission of regulatory information across cell division, yet how active chromatin states are molecularly preserved during mitosis and how they contribute to postmitotic cell fate decisions remain unresolved. Here, we demonstrate that the acetyltransferases KAT6 and KAT7 remain chromatin-bound and catalytically active throughout mitosis in mouse and human pluripotent stem cells. Acute KAT6/7 depletion disrupts mitotic histone acetylation and the retention of multiple chromatin regulators with minimal effects on chromatin accessibility. Mechanistically, KAT6/7 bookmark both self renewal and developmental gene loci, where they are required for post-mitotic transcriptional reactivation and priming of lineage-specific programs. Consistently, genes impaired during postmitotic reactivation also fail to activate during neuronal differentiation upon continuous KAT6/7 perturbation, compromising the establishment of the neuronal program and identity. Altogether, our findings identify KAT6 and KAT7 as a cooperative mitotic chromatin maintenance system that couples active histone acetylation to preservation of chromatin composition, transcriptional memory, and developmental competence across cell division, extending the bookmarking function beyond transcriptional memory. These findings also provide a new framework for understanding KAT6/7 function in neurodevelopmental disorders and cancer.

bioRxiv (Cold Spring Harbor Laboratory)
Albert Einstein College of Medicine (US), Memorial Sloan Kettering Cancer Center (US), Cornell University (US), Weill Cornell Medicine (US), Weill Cornell Medical Center (US), Rockefeller University (US)
Genomics and Chromatin Dynamics
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