METROLOGICAL BENCHMARK: BIDSIM VS. GIBBS SAMPLING

In high-dimensional categorical Bayesian inference, researchers frequently rely on Markov Chain Monte Carlo (MCMC) methods such as Gibbs Sampling, Metropolis-Hastings, or Hamiltonian Monte Carlo (HMC/NUTS). While Gibbs sampling decomposes a joint posterior probability distribution by sampling each variable sequentially from its conditional distribution, it inherently remains a stochastic Markov chain algorithm. Consequently, Gibbs sampling suffers from severe sample autocorrelation, burn-in CPU waste, and runtime non-determinism. In contrast, BIDSim (Chained Virtual Urns Simulator) replaces Markov chain iterations entirely with a two-phase hybrid architecture: deterministic knowledge compilation followed by ultra-fast, independent scenario draws with zero autocorrelation (lag-1 = 0.000) and 100% Effective Sample Size (ESS).

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-11-10
DOI
https://doi.org/10.5281/zenodo.24105182
Primary Topic
Markov Chains and Monte Carlo Methods
Type
article
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article

METROLOGICAL BENCHMARK: BIDSIM VS. GIBBS SAMPLING

Bernard Pargamin
Zenodo (CERN European Organization for Nuclear Research)
Markov Chains and Monte Carlo Methods
article

METROLOGICAL BENCHMARK: BIDSIM VS. GIBBS SAMPLING

Bernard Pargamin
article en

Abstract

In high-dimensional categorical Bayesian inference, researchers frequently rely on Markov Chain Monte Carlo (MCMC) methods such as Gibbs Sampling, Metropolis-Hastings, or Hamiltonian Monte Carlo (HMC/NUTS). While Gibbs sampling decomposes a joint posterior probability distribution by sampling each variable sequentially from its conditional distribution, it inherently remains a stochastic Markov chain algorithm. Consequently, Gibbs sampling suffers from severe sample autocorrelation, burn-in CPU waste, and runtime non-determinism. In contrast, BIDSim (Chained Virtual Urns Simulator) replaces Markov chain iterations entirely with a two-phase hybrid architecture: deterministic knowledge compilation followed by ultra-fast, independent scenario draws with zero autocorrelation (lag-1 = 0.000) and 100% Effective Sample Size (ESS).

Zenodo (CERN European Organization for Nuclear Research)
Markov Chains and Monte Carlo Methods
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