Stereoelectronic Modulation of Hyperconjugative Networks in Saturated Heterocycles: Bridging Hilbert-Space NBO Perturbations with Real-Space QTAIM Electron Cloud Distortions

The stereoelectronic modulation of hyperconjugative networks dictates the fundamental parameters of saturated heterocycles. Herein is presented a quantum chemical investigation into the anomeric effect across a matrix of 2-substituted oxygen and sulfur heterocycles utilising a GPU-accelerated pySCF-GPU optimisation pipeline at the CAM-B3LYP-D3(BJ)/def2-TZVPD/PCM level of theory, coupled with orbital perturbation evaluations via Firefly B3LYP-D3(BJ)/def2-TZVPD; QTAIM topology analyses via Multiwfn. For the axial 2-fluoro anomer, the exo -anomeric effect is heavily magnified; NBO maps a massive ( no → σ * C-F ) stabilisation energy ( E (2) = 20.11 kcal/mol). Real-space QTAIM maps confirm the physical consequences of this; compared to a standard C-C baseline (∇² ρ bcp ~= -0.6328 a.u.), the active C3-O2 bond exhibits a π -like charge concentration spike (∇² ρ bcp = -0.8182 a.u., LBO = 0.503, e = 0.1396), while the adjacent C-F bond is thinned and flattened (∇² ρ bcp = -0.3401 a.u., LBO = 0.107, e = 0.1827). Conversely, oxo -protonation triggers the anti -anomeric effect. Sequestering the dominant lone pair into a stable σ O-H bond quenches the exo engine, leaving a residual contribution from the σ -type lone pair and driving an intensive internal ( n F → σ * C-O ) back-donation ( E (2) = 17.38 kcal/mol), that forces the endocyclic bond relaxation to 1.483 Å in the anti -oxonium conformer.

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Publication Details

Journal
ChemRxiv
Published
2026-11-10
DOI
https://doi.org/10.26434/chemrxiv.15011920/v1
Primary Topic
Advanced Chemical Physics Studies
Type
preprint
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Stereoelectronic Modulation of Hyperconjugative Networks in Saturated Heterocycles: Bridging Hilbert-Space NBO Perturbations with Real-Space QTAIM Electron Cloud Distortions

Jonathan P. Miller
ChemRxiv
Advanced Chemical Physics Studies
preprint

Stereoelectronic Modulation of Hyperconjugative Networks in Saturated Heterocycles: Bridging Hilbert-Space NBO Perturbations with Real-Space QTAIM Electron Cloud Distortions

Jonathan P. Miller
preprint en

Abstract

The stereoelectronic modulation of hyperconjugative networks dictates the fundamental parameters of saturated heterocycles. Herein is presented a quantum chemical investigation into the anomeric effect across a matrix of 2-substituted oxygen and sulfur heterocycles utilising a GPU-accelerated pySCF-GPU optimisation pipeline at the CAM-B3LYP-D3(BJ)/def2-TZVPD/PCM level of theory, coupled with orbital perturbation evaluations via Firefly B3LYP-D3(BJ)/def2-TZVPD; QTAIM topology analyses via Multiwfn. For the axial 2-fluoro anomer, the exo -anomeric effect is heavily magnified; NBO maps a massive ( no → σ * C-F ) stabilisation energy ( E (2) = 20.11 kcal/mol). Real-space QTAIM maps confirm the physical consequences of this; compared to a standard C-C baseline (∇² ρ bcp ~= -0.6328 a.u.), the active C3-O2 bond exhibits a π -like charge concentration spike (∇² ρ bcp = -0.8182 a.u., LBO = 0.503, e = 0.1396), while the adjacent C-F bond is thinned and flattened (∇² ρ bcp = -0.3401 a.u., LBO = 0.107, e = 0.1827). Conversely, oxo -protonation triggers the anti -anomeric effect. Sequestering the dominant lone pair into a stable σ O-H bond quenches the exo engine, leaving a residual contribution from the σ -type lone pair and driving an intensive internal ( n F → σ * C-O ) back-donation ( E (2) = 17.38 kcal/mol), that forces the endocyclic bond relaxation to 1.483 Å in the anti -oxonium conformer.

ChemRxiv
Advanced Chemical Physics Studies
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