From presence to abundance: a systematic review of intestinal colonisation density as a predictor of subsequent infection — data and search archive

Data, search strategies and screening decisions for a systematic review of intestinal colonisation density as a predictor of subsequent infection. Contains the literal search strings as run in Europe PMC and Embase with per-line hit counts, a reproduction audit of the originally published strategy, a relative-recall audit against the 65 included studies, record-level screening decisions for 16,567 records, a stratified blinded audit of exclusions with per-code false-exclusion rates, the study-level extraction table, threshold-provenance table, QUIPS risk-of-bias ratings and the correction ledger.

Authors

Publication Details

Journal
Open Science Framework
Published
2026-11-10
DOI
https://doi.org/10.17605/osf.io/se6cb
Primary Topic
Gut microbiota and health
Type
article
Field-Weighted Citation Impact
0.00
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article

From presence to abundance: a systematic review of intestinal colonisation density as a predictor of subsequent infection — data and search archive

WCS
Open Science Framework
Gut microbiota and health
article

From presence to abundance: a systematic review of intestinal colonisation density as a predictor of subsequent infection — data and search archive

WCS
article en

Abstract

Data, search strategies and screening decisions for a systematic review of intestinal colonisation density as a predictor of subsequent infection. Contains the literal search strings as run in Europe PMC and Embase with per-line hit counts, a reproduction audit of the originally published strategy, a relative-recall audit against the 65 included studies, record-level screening decisions for 16,567 records, a stratified blinded audit of exclusions with per-code false-exclusion rates, the study-level extraction table, threshold-provenance table, QUIPS risk-of-bias ratings and the correction ledger.

Open Science Framework
Gut microbiota and health
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From presence to abundance: a systematic review of intestinal colonisation density as a predictor of subsequent infection — data and search archive — WCS · Open Science Framework (2026) | TGRS Research Map | TGRS