A forward genetics workflow for EMS mutagenesis, agar-based screening, and genomic analysis of Macrocystis pyrifera gametophytes

In this study we establish a proof-of-concept workflow for conducting a mutagenesis screen in Macrocystis pyrifera g ametophytes. We accomplish this by treating the gametophytes with chemical mutagen ethyl methanesulfonate (EMS), which is known to induce G > A and C > T transitions. We then culture the EMS-treated gametophytes on solid media to immobilize them for streamlined screening and strain isolation. Whole-genome sequencing identified G > A and C > T substitutions consistent with EMS mutagenesis. In this workflow, agar-based culture is used as a practical tool for immobilizing, screening, and recovering mutagenized M. pyrifera gametophytes for downstream analysis.

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Publication Details

Journal
Frontiers in Genetics
Published
2026-11-09
DOI
https://doi.org/10.3389/fgene.2026.1958697
Primary Topic
Plant Genetic and Mutation Studies
Type
article
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article

A forward genetics workflow for EMS mutagenesis, agar-based screening, and genomic analysis of Macrocystis pyrifera gametophytes

Sergey V. Nuzhdin, Brandon Vong, Zhihan Hua, Isabella Langa et al.
Frontiers in Genetics
Plant Genetic and Mutation Studies
article

A forward genetics workflow for EMS mutagenesis, agar-based screening, and genomic analysis of Macrocystis pyrifera gametophytes

Sergey V. Nuzhdin, Brandon Vong, Zhihan Hua, Isabella Langa, Jack Monney
article en

Abstract

In this study we establish a proof-of-concept workflow for conducting a mutagenesis screen in Macrocystis pyrifera g ametophytes. We accomplish this by treating the gametophytes with chemical mutagen ethyl methanesulfonate (EMS), which is known to induce G > A and C > T transitions. We then culture the EMS-treated gametophytes on solid media to immobilize them for streamlined screening and strain isolation. Whole-genome sequencing identified G > A and C > T substitutions consistent with EMS mutagenesis. In this workflow, agar-based culture is used as a practical tool for immobilizing, screening, and recovering mutagenized M. pyrifera gametophytes for downstream analysis.

Frontiers in GeneticsVol. 17
University of Southern California (US)
Plant Genetic and Mutation Studies
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