Development of Virus-Mimicking Artificial Positive Controls for TaqMan® real-time PCR assays

TaqMan® real time PCR is the gold standard for virus detection, yet laboratories face challenges with acquiring positive controls, due to biosecurity restrictions and limited supply. Building on virus-mimicking artificial positive controls (ViMAPC) used in endpoint PCR, we have developed ViMAPCs for TaqMan® PCR. We utilize a sister virus taxon to create a positive control template which contains the target virus primer and probe sequences. As a proof-of-concept the novel strategy has been tested using both RNA and DNA viruses. ViMAPCs were tested in parallel with targeted virus-infected material with cross-verification tests carried out in a second laboratory and all met preset equivalence criteria. The technology provides highly reproducible positive controls for virus diagnostics allowing for the use of TaqMan® PCR when the procurement of true positive controls is difficult, such as a new incursion or biosecurity breaches.

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Publication Details

Journal
Plant Disease
Published
2026-11-08
DOI
https://doi.org/10.1094/pdis-07-26-1392-sr
Primary Topic
Plant Virus Research Studies
Type
article
Field-Weighted Citation Impact
0.00
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article

Development of Virus-Mimicking Artificial Positive Controls for TaqMan® real-time PCR assays

Daisy Stainton, Andrea Sierra-Mejia, Bolaji Osundahunsi, Shivani Singh et al.
Plant Disease
Plant Virus Research Studies
article

Development of Virus-Mimicking Artificial Positive Controls for TaqMan® real-time PCR assays

Daisy Stainton, Andrea Sierra-Mejia, Bolaji Osundahunsi, Shivani Singh, Habeeb Atanda, Ioannis Emmanouil Tzanetakis
article en

Abstract

TaqMan® real time PCR is the gold standard for virus detection, yet laboratories face challenges with acquiring positive controls, due to biosecurity restrictions and limited supply. Building on virus-mimicking artificial positive controls (ViMAPC) used in endpoint PCR, we have developed ViMAPCs for TaqMan® PCR. We utilize a sister virus taxon to create a positive control template which contains the target virus primer and probe sequences. As a proof-of-concept the novel strategy has been tested using both RNA and DNA viruses. ViMAPCs were tested in parallel with targeted virus-infected material with cross-verification tests carried out in a second laboratory and all met preset equivalence criteria. The technology provides highly reproducible positive controls for virus diagnostics allowing for the use of TaqMan® PCR when the procurement of true positive controls is difficult, such as a new incursion or biosecurity breaches.

Plant Disease
University of Arkansas System (US), University of Arkansas at Fayetteville (US)
Plant Virus Research Studies
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