Acid Trap Dataset (Virtual Screening, Lung Cancer)

This Zenodo record contains the FREE SAMPLE only — a stratified subset of the full Acid Trap Dataset, not the complete dataset. Full dataset (all 3 blocks, 179,351 rows), technical passport, and purchase: https://sentineldata.com.ua/dataset/acid-trap-dataset Sample composition (this record — true subset, stratified sampling, not a re-generation): sample_block1_virtual_screen.parquet — 363 rows (5% of Block 1, stratified by valve combination) sample_block2_virtual_patients.parquet — 782 rows (5% of Block 2, stratified by valve combination) sample_block3_synthetic_cohort.parquet — 1,564 rows (1% of Block 3, stratified by histology × valve combination) Dataset Architecture & Specifications The Acid Trap Dataset is a fully synthetic, model-generated dataset simulating a four-valve intracellular pH-collapse hypothesis in lung cancer. Every record is an in silico prediction from an explicit ODE system; Blocks 2 and 3 are anchored to real TCGA LUAD/LUSC expression distributions (or synthetic profiles derived from their covariance structure) via a documented expression-to-parameter mapping. This dataset is not patient data, not clinical evidence, and is not intended for clinical use. Total Rows 179,351 Unique Virtual / Synthetic Profiles 10,120 Treatment Conditions 17 Blocks 3 (Virtual Screen, Virtual Patients, Synthetic Cohort) Data Schema Apache Parquet (Snappy) Source Expression ... Full description with all tables is on the Wiki page of this project. Full dataset and purchase: https://sentineldata.com.ua/dataset/acid-trap-dataset . Zenodo copy: https://doi.org/10.5281/zenodo.22726285

Authors

Publication Details

Journal
Open Science Framework
Published
2026-11-07
DOI
https://doi.org/10.17605/osf.io/jvkwg
Primary Topic
Cancer, Hypoxia, and Metabolism
Type
article
Field-Weighted Citation Impact
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article

Acid Trap Dataset (Virtual Screening, Lung Cancer)

Chekerskyi Maksym
3 links
Open Science Framework
Cancer, Hypoxia, and Metabolism
article

Acid Trap Dataset (Virtual Screening, Lung Cancer)

Chekerskyi Maksym
article en

Abstract

This Zenodo record contains the FREE SAMPLE only — a stratified subset of the full Acid Trap Dataset, not the complete dataset. Full dataset (all 3 blocks, 179,351 rows), technical passport, and purchase: https://sentineldata.com.ua/dataset/acid-trap-dataset Sample composition (this record — true subset, stratified sampling, not a re-generation): sample_block1_virtual_screen.parquet — 363 rows (5% of Block 1, stratified by valve combination) sample_block2_virtual_patients.parquet — 782 rows (5% of Block 2, stratified by valve combination) sample_block3_synthetic_cohort.parquet — 1,564 rows (1% of Block 3, stratified by histology × valve combination) Dataset Architecture & Specifications The Acid Trap Dataset is a fully synthetic, model-generated dataset simulating a four-valve intracellular pH-collapse hypothesis in lung cancer. Every record is an in silico prediction from an explicit ODE system; Blocks 2 and 3 are anchored to real TCGA LUAD/LUSC expression distributions (or synthetic profiles derived from their covariance structure) via a documented expression-to-parameter mapping. This dataset is not patient data, not clinical evidence, and is not intended for clinical use. Total Rows 179,351 Unique Virtual / Synthetic Profiles 10,120 Treatment Conditions 17 Blocks 3 (Virtual Screen, Virtual Patients, Synthetic Cohort) Data Schema Apache Parquet (Snappy) Source Expression ... Full description with all tables is on the Wiki page of this project. Full dataset and purchase: https://sentineldata.com.ua/dataset/acid-trap-dataset . Zenodo copy: https://doi.org/10.5281/zenodo.22726285

Open Science Framework
Good health and well-being
Openalex Percentile: Top 21%
Cancer, Hypoxia, and Metabolism
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