Monomer sequence influences electron transport in aromatic amide foldamers

Sequence encodes structure and function in biomolecules, but whether monomer order influences electron transport in synthetic foldamers remains incompletely understood. Here, we investigate aromatic amide foldamers built from a peptide-inspired secondary amide and its N-methylated peptoid-inspired analogue. Single molecule conductance measurements reveal that the all-secondary-amide foldamer exhibits a well-defined conductance state (~10-3.8 G0), comparable to the substantially shorter secondary-amide building block (~10-3.7 G0), whereas incorporation of N-methylated units produces lower or less-defined conductance features. Notably, foldamers with identical composition but different sequence arrangements exhibit distinct conductance distributions, demonstrating that sequence order influences electron transport. Displacement and flicker noise analyses indicate compact junction geometries with substantial throughspace contributions, and the all secondary amide foldamer responds most strongly to changes in applied bias and molecular concentration. Computational modeling using molecular dynamics (MD) simulations, density functional theory (DFT), and nonequilibrium Green's function (NEGF)-DFT calculations provide insight into sequencedependent conformational variability. Overall, this work demonstrates that oligomerization can generate electron transport behavior that cannot be inferred directly from isolated monomer properties and establishes monomer order as a design variable for molecular electronics.

Authors

Institutions

Publication Details

Journal
ChemRxiv
Published
2026-11-06
DOI
https://doi.org/10.26434/chemrxiv.15011800/v1
Primary Topic
Molecular Junctions and Nanostructures
Type
preprint

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
NOV
preprint

Monomer sequence influences electron transport in aromatic amide foldamers

Aya Tanatani, Iwao Okamoto, Rajarshi Samajdar, Hassan Nadeem et al.
2 links
ChemRxiv
Molecular Junctions and Nanostructures
preprint

Monomer sequence influences electron transport in aromatic amide foldamers

Aya Tanatani, Iwao Okamoto, Rajarshi Samajdar, Hassan Nadeem, Yui Kidokoro, Diwakar Shukla
preprint en

Abstract

Sequence encodes structure and function in biomolecules, but whether monomer order influences electron transport in synthetic foldamers remains incompletely understood. Here, we investigate aromatic amide foldamers built from a peptide-inspired secondary amide and its N-methylated peptoid-inspired analogue. Single molecule conductance measurements reveal that the all-secondary-amide foldamer exhibits a well-defined conductance state (~10-3.8 G0), comparable to the substantially shorter secondary-amide building block (~10-3.7 G0), whereas incorporation of N-methylated units produces lower or less-defined conductance features. Notably, foldamers with identical composition but different sequence arrangements exhibit distinct conductance distributions, demonstrating that sequence order influences electron transport. Displacement and flicker noise analyses indicate compact junction geometries with substantial throughspace contributions, and the all secondary amide foldamer responds most strongly to changes in applied bias and molecular concentration. Computational modeling using molecular dynamics (MD) simulations, density functional theory (DFT), and nonequilibrium Green's function (NEGF)-DFT calculations provide insight into sequencedependent conformational variability. Overall, this work demonstrates that oligomerization can generate electron transport behavior that cannot be inferred directly from isolated monomer properties and establishes monomer order as a design variable for molecular electronics.

ChemRxiv
University of Illinois Urbana-Champaign (US), Ochanomizu University (JP), Showa Pharmaceutical University (JP)
Army Research Office
Molecular Junctions and Nanostructures
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Laika access coming soon
Monomer sequence influences electron transport in aromatic amide foldamers — Aya Tanatani, Iwao Okamoto, et al. · ChemRxiv (2026) | TGRS Research Map | TGRS