BioCosmos: computer vision and large language models for large-scale image-based biodiversity data and trait exploration

Millions of natural history specimen images are now online, but poor discoverability keeps their rich phenotypic and evolutionary data out of reach for most users. We developed BioCosmos, a web platform that combines conventional biodiversity databases with emerging computer vision and large language models for image retrieval, visual feature recognition, and natural language queries. Its first implementation, LepiVerse (https://lepiverse.com), is a butterfly web portal with more than 600,000 specimen images aggregated from natural history museums worldwide via GBIF, SCAN, and Ecdysis, and curated through taxonomic harmonization and georeference validation pipelines. BioCosmos features visual similarity, interactive morphospace plots, and text- and image-based searches, alongside species pages enriched with data from GenBank, LepTraits, Wikipedia, and Crossref. The platform demonstrates how an open-source, low-cost emerging AI can make vast image collections accessible to a broad audience, while highlighting the digitization gap between the Global North and South.

Authors

Institutions

Publication Details

Published
2026-11-06
DOI
https://doi.org/10.32942/x2c11r
Primary Topic
Research Data Management Practices
Type
preprint

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
NOV
preprint

BioCosmos: computer vision and large language models for large-scale image-based biodiversity data and trait exploration

J.A.B. Fortes, Oliver Dobon, Heru Handika, Moritz Lürig et al.
2 links
Research Data Management Practices
preprint

BioCosmos: computer vision and large language models for large-scale image-based biodiversity data and trait exploration

J.A.B. Fortes, Oliver Dobon, Heru Handika, Moritz Lürig, Arthur Porto, Michael J. Elliott, Breanna Shi, Venkata Yarava, Justin Sobayo, Kira Nichtawitz
preprint en

Abstract

Millions of natural history specimen images are now online, but poor discoverability keeps their rich phenotypic and evolutionary data out of reach for most users. We developed BioCosmos, a web platform that combines conventional biodiversity databases with emerging computer vision and large language models for image retrieval, visual feature recognition, and natural language queries. Its first implementation, LepiVerse (https://lepiverse.com), is a butterfly web portal with more than 600,000 specimen images aggregated from natural history museums worldwide via GBIF, SCAN, and Ecdysis, and curated through taxonomic harmonization and georeference validation pipelines. BioCosmos features visual similarity, interactive morphospace plots, and text- and image-based searches, alongside species pages enriched with data from GenBank, LepTraits, Wikipedia, and Crossref. The platform demonstrates how an open-source, low-cost emerging AI can make vast image collections accessible to a broad audience, while highlighting the digitization gap between the Global North and South.

Georgia Institute of Technology (US), Florida Museum of Natural History (US), University of Florida (US), Leibniz Institute for the Analysis of Biodiversity Change (DE)
Florida Museum of Natural History
Research Data Management Practices
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Laika access coming soon