The genome sequence of sour fig, Carpobrotus edulis N.E.Br. (Caryophyllales: Aizoaceae)
We present a genome assembly of Carpobrotus edulis (sour fig; Streptophyta; Magnoliopsida; Caryophyllales; Aizoaceae). The assembly consists of two haplotypes with total lengths of 939.89 megabases and 955.96 megabases. Most of the haplotype 1 assembly (93.62%) was scaffolded into nine chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial sequences have lengths of 3333.84 and 189.62 kilobases and the plastid genome assembly has a length of 148.81 kilobases. Gene annotation of the haplotype 1 assembly by Ensembl identified 20,735 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.
Authors
- Ilia J. Leitch (ORCID: https://orcid.org/0000-0002-3837-8186)
- Maarten J. M. Christenhusz (ORCID: https://orcid.org/0000-0003-1398-8743)
- Michael F. Fay (ORCID: https://orcid.org/0000-0003-3491-9093)
- Darwin Tree of Life Barcoding Collective
- Royal Botanic Gardens Kew Genome Acquisition Lab
- Tree of Life Core Informatics collective
Institutions
- Royal Botanic Gardens, Kew (GB)
- Botanical Society of Britain and Ireland (GB)
Publication Details
- Journal
- Wellcome Open Research
- Published
- 2026-11-06
- DOI
- https://doi.org/10.12688/wellcomeopenres.28107.1
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Wellcome Trust