Matched Static Feedback Permits Different Notch-Delta Patterning Dynamics

Abstract Notch--Delta lateral inhibition amplifies differences between neighbouring cells, but its steady-state response leaves several dynamical predictions unresolved. We compare explicit signalling circuits while successively matching their static response, mean downstream response time and local linear spectrum. Static loop gain fixes stationary onset. For a negative graph mode, sufficiently strong cis inactivation makes the mode block sign-similar to a Metzler matrix; static gain then gives a necessary and sufficient stability criterion. This condition holds at 775 of 4,000 reference parameter sets; all 12 disagreements between the static-gain test and the full K-mode spectrum lie outside this regime. At a reference patterning point, replacing finite ASC relaxation by its matched quasi-static response raises the K-mode growth rate from 0.103 to 1.597. Dividing the downstream response into four stages at the same mean time makes a uniform oscillation grow faster than the stationary K pattern. Finally, circuits with identical local linear spectra can select different ASC-high cells within the same competent patch. These comparisons connect graph-based gain criteria to explicit pathway kinetics and identify which predictions require information beyond the static response.

Authors

Institutions

Publication Details

Journal
Research Square
Published
2026-11-04
DOI
https://doi.org/10.21203/rs.3.rs-11191766/v2
Primary Topic
Developmental Biology and Gene Regulation
Type
preprint
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
preprint

Matched Static Feedback Permits Different Notch-Delta Patterning Dynamics

Hyeonje Yang
Research Square
Developmental Biology and Gene Regulation
preprint

Matched Static Feedback Permits Different Notch-Delta Patterning Dynamics

Hyeonje Yang
preprint en

Abstract

Abstract Notch--Delta lateral inhibition amplifies differences between neighbouring cells, but its steady-state response leaves several dynamical predictions unresolved. We compare explicit signalling circuits while successively matching their static response, mean downstream response time and local linear spectrum. Static loop gain fixes stationary onset. For a negative graph mode, sufficiently strong cis inactivation makes the mode block sign-similar to a Metzler matrix; static gain then gives a necessary and sufficient stability criterion. This condition holds at 775 of 4,000 reference parameter sets; all 12 disagreements between the static-gain test and the full K-mode spectrum lie outside this regime. At a reference patterning point, replacing finite ASC relaxation by its matched quasi-static response raises the K-mode growth rate from 0.103 to 1.597. Dividing the downstream response into four stages at the same mean time makes a uniform oscillation grow faster than the stationary K pattern. Finally, circuits with identical local linear spectra can select different ASC-high cells within the same competent patch. These comparisons connect graph-based gain criteria to explicit pathway kinetics and identify which predictions require information beyond the static response.

Research Square
Seoul National University (KR)
Developmental Biology and Gene Regulation
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Laika access coming soon