Geometric Reaction Path Alignment for Kinetic Feasibility Assessment

Automated reaction exploration can generate more candidate elementary steps than can be practically characterized with transition-state searches. Thermodynamic screening provides an inexpensive first filter, but endpoint energies contain no information about the path connecting reactants and products. Here, we introduce SPARTA (Steric Path Alignment for Reactive Transformation Assessment), a geometric kinetic proxy that generates reaction-biased endpoint conformers, refines them through iterative image-dependent pair potential path optimization, and evaluates electronic single-point energies along the resulting path. Across two large reaction-barrier datasets, the SPARTA barrier discriminates highand low-barrier reactions better than reaction energy. Across curated reaction classes, SPARTA reproduces experimentally established steric trends when kinetic differences are governed by accessibility to the reactive configuration, while identifying clear limitations for stereoelectronically or orbital-symmetrycontrolled transformations. Applied to glucose pyrolysis and formose reaction networks, a single SPARTA threshold retains more than 98% of reactions with reference barriers below 50 kcal mol−1. In the glucose network, adding SPARTA after thermodynamic screening reduces the number of candidate transitionstate searches from 13,436 to 4,760 while retaining all 241 reactions below 20 kcal mol−1. These results establish the geometric accessibility of the reaction path as a useful complement to thermodynamic screening for reducing the cost of automated reaction-network exploration.

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Publication Details

Journal
ChemRxiv
Published
2026-11-04
DOI
https://doi.org/10.26434/chemrxiv.15011670/v1
Primary Topic
Advanced Chemical Physics Studies
Type
preprint
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preprint

Geometric Reaction Path Alignment for Kinetic Feasibility Assessment

Connor W. Coley, Nicholas Casetti
ChemRxiv
Advanced Chemical Physics Studies
preprint

Geometric Reaction Path Alignment for Kinetic Feasibility Assessment

Connor W. Coley, Nicholas Casetti
preprint en

Abstract

Automated reaction exploration can generate more candidate elementary steps than can be practically characterized with transition-state searches. Thermodynamic screening provides an inexpensive first filter, but endpoint energies contain no information about the path connecting reactants and products. Here, we introduce SPARTA (Steric Path Alignment for Reactive Transformation Assessment), a geometric kinetic proxy that generates reaction-biased endpoint conformers, refines them through iterative image-dependent pair potential path optimization, and evaluates electronic single-point energies along the resulting path. Across two large reaction-barrier datasets, the SPARTA barrier discriminates highand low-barrier reactions better than reaction energy. Across curated reaction classes, SPARTA reproduces experimentally established steric trends when kinetic differences are governed by accessibility to the reactive configuration, while identifying clear limitations for stereoelectronically or orbital-symmetrycontrolled transformations. Applied to glucose pyrolysis and formose reaction networks, a single SPARTA threshold retains more than 98% of reactions with reference barriers below 50 kcal mol−1. In the glucose network, adding SPARTA after thermodynamic screening reduces the number of candidate transitionstate searches from 13,436 to 4,760 while retaining all 241 reactions below 20 kcal mol−1. These results establish the geometric accessibility of the reaction path as a useful complement to thermodynamic screening for reducing the cost of automated reaction-network exploration.

ChemRxiv
Advanced Chemical Physics Studies
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