Calibrated Confidence and Confidence-Stratified Triage for Diabetic Retinopathy Severity Grading: A Class-Imbalance-Aware Deep Learning Study on the DDR Dataset

Background: Deep learning systems for diabetic retinopathy (DR) grading are usually reported through accuracy and area under the curve, yet clinical use depends on whether a model’s confidence can be trusted. Problem: calibration and confidence-based triage are rarely evaluated on large, naturally imbalanced five-grade datasets. Objective: to quantify how temperature scaling and Monte Carlo (MC) Dropout change the reliability of an EfficientNet-B0 DR grader and to convert calibrated confidence into auto-clear/human-review operating points. Materials: A total of 12,522 DDR fundus photographs on the five ICDR grades, only 1.9% of them severe non-proliferative DR. Methods: Methods included five-fold cross-validation grouped by near-duplicate images, with inner calibration splits; overall and per-grade expected calibration error (ECE); clustered bootstrap; comparison with other calibration maps, loss functions and backbones; Grad-CAM and LIME. Results: Macro-F1 was 0.705 (95% CI 0.691–0.718). Temperature scaling reduced ECE from 0.186 to 0.078 without changing any prediction, but grade-specific maps were needed to bring per-grade ECE below 0.01. Mutual information from MC-Dropout flagged errors better than confidence (AUROC 0.748 vs. 0.650). At a no-DR threshold of 0.80, 30.1% of images were auto-cleared with a 1.46% referable-DR false-clear rate. Conclusions: One temperature corrected most top-label miscalibration but not the grade-level error caused by class weighting; the triage thresholds need external validation before clinical use.

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Publication Details

Journal
Bioengineering
Published
2026-11-03
DOI
https://doi.org/10.3390/bioengineering13111304
Primary Topic
Retinal Imaging and Analysis
Type
article
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article

Calibrated Confidence and Confidence-Stratified Triage for Diabetic Retinopathy Severity Grading: A Class-Imbalance-Aware Deep Learning Study on the DDR Dataset

Rotimi-Williams Bello, Oluwasegun Julius Aroba, Roseline Oluwaseun Ogundokun, Samson Udoka Alfred
Bioengineering
Retinal Imaging and Analysis
article

Calibrated Confidence and Confidence-Stratified Triage for Diabetic Retinopathy Severity Grading: A Class-Imbalance-Aware Deep Learning Study on the DDR Dataset

Rotimi-Williams Bello, Oluwasegun Julius Aroba, Roseline Oluwaseun Ogundokun, Samson Udoka Alfred
article en

Abstract

Background: Deep learning systems for diabetic retinopathy (DR) grading are usually reported through accuracy and area under the curve, yet clinical use depends on whether a model’s confidence can be trusted. Problem: calibration and confidence-based triage are rarely evaluated on large, naturally imbalanced five-grade datasets. Objective: to quantify how temperature scaling and Monte Carlo (MC) Dropout change the reliability of an EfficientNet-B0 DR grader and to convert calibrated confidence into auto-clear/human-review operating points. Materials: A total of 12,522 DDR fundus photographs on the five ICDR grades, only 1.9% of them severe non-proliferative DR. Methods: Methods included five-fold cross-validation grouped by near-duplicate images, with inner calibration splits; overall and per-grade expected calibration error (ECE); clustered bootstrap; comparison with other calibration maps, loss functions and backbones; Grad-CAM and LIME. Results: Macro-F1 was 0.705 (95% CI 0.691–0.718). Temperature scaling reduced ECE from 0.186 to 0.078 without changing any prediction, but grade-specific maps were needed to bring per-grade ECE below 0.01. Mutual information from MC-Dropout flagged errors better than confidence (AUROC 0.748 vs. 0.650). At a no-DR threshold of 0.80, 30.1% of images were auto-cleared with a 1.46% referable-DR false-clear rate. Conclusions: One temperature corrected most top-label miscalibration but not the grade-level error caused by class weighting; the triage thresholds need external validation before clinical use.

BioengineeringVol. 13(11)
Kaunas University of Technology (LT), Durban University of Technology (ZA), Redeemer's University (NG), Nasarawa State University (NG), University of Africa (ZM)
Openalex Percentile: Top 14%
Retinal Imaging and Analysis
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