Evidence of White Matter R 2 * Homogenization After Formalin Fixation

ABSTRACT Purpose Disentangling intrinsic susceptibility‐driven R 2 * characteristics in white matter (WM) from fixation‐related effects using in vivo, postmortem (PM) in situ, and formalin‐fixed PM ex situ MRI. Methods DTI and multi‐echo gradient‐echo MRI were acquired in vivo, PM in situ and PM ex situ. PM cases included neurologically healthy individuals and patients with amyotrophic lateral sclerosis (ALS). Voxel‐wise R 2 * values were obtained using a mono‐exponential fit and evaluated both as whole WM averages and according to WM fiber‐to‐field orientation. For the PM ex situ orientation‐dependency analysis, PM ex situ R 2 * data were registered to the corresponding in situ DTI acquisition. Averaged as well as orientation‐dependent R 2 * profiles were pooled across WM and compared across conditions. Results Whole WM averaged and orientation‐dependent R 2 * values differed across in vivo, PM in situ, and PM ex situ conditions. No differences were observed between PM in situ healthy and PM in situ ALS cases. Compared with in vivo measurements, both PM conditions showed elevated whole WM averaged R 2 * values and reduced orientation dependency, with the strongest R 2 * anisotropy in vivo and nearly absent orientation dependency in the PM ex situ condition. Conclusion While orientation‐dependent R 2 * is reduced but preserved in unfixed PM in situ tissue, it is largely eliminated after prolonged formalin fixation without rehydration, likely due to microstructural reorganization and protein cross‐linking. Collectively, these findings indicate that orientation‐dependent R 2 * measured in fixed tissue has limited translational validity, while underscoring its sensitivity to intact microstructural organization in vivo and in unfixed PM tissue.

Authors

Institutions

Publication Details

Journal
Magnetic Resonance in Medicine
Published
2026-11-02
DOI
https://doi.org/10.1002/mrm.70646
Primary Topic
Advanced Neuroimaging Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Evidence of White Matter R 2 * Homogenization After Formalin Fixation

Dominique Neuhaus, Celine Berger, Christoph Robert Birkl, Eva Scheurer et al.
Magnetic Resonance in Medicine
Advanced Neuroimaging Techniques and Applications
article

Evidence of White Matter R 2 * Homogenization After Formalin Fixation

Dominique Neuhaus, Celine Berger, Christoph Robert Birkl, Eva Scheurer, Regina Schlaeger, Maria Janina Wendebourg, Melanie Bauer, Claudia Lenz, Lennart Bedarf
article en

Abstract

ABSTRACT Purpose Disentangling intrinsic susceptibility‐driven R 2 * characteristics in white matter (WM) from fixation‐related effects using in vivo, postmortem (PM) in situ, and formalin‐fixed PM ex situ MRI. Methods DTI and multi‐echo gradient‐echo MRI were acquired in vivo, PM in situ and PM ex situ. PM cases included neurologically healthy individuals and patients with amyotrophic lateral sclerosis (ALS). Voxel‐wise R 2 * values were obtained using a mono‐exponential fit and evaluated both as whole WM averages and according to WM fiber‐to‐field orientation. For the PM ex situ orientation‐dependency analysis, PM ex situ R 2 * data were registered to the corresponding in situ DTI acquisition. Averaged as well as orientation‐dependent R 2 * profiles were pooled across WM and compared across conditions. Results Whole WM averaged and orientation‐dependent R 2 * values differed across in vivo, PM in situ, and PM ex situ conditions. No differences were observed between PM in situ healthy and PM in situ ALS cases. Compared with in vivo measurements, both PM conditions showed elevated whole WM averaged R 2 * values and reduced orientation dependency, with the strongest R 2 * anisotropy in vivo and nearly absent orientation dependency in the PM ex situ condition. Conclusion While orientation‐dependent R 2 * is reduced but preserved in unfixed PM in situ tissue, it is largely eliminated after prolonged formalin fixation without rehydration, likely due to microstructural reorganization and protein cross‐linking. Collectively, these findings indicate that orientation‐dependent R 2 * measured in fixed tissue has limited translational validity, while underscoring its sensitivity to intact microstructural organization in vivo and in unfixed PM tissue.

Magnetic Resonance in Medicine
Innsbruck Medical University (AT), University of Basel (CH), Universität Innsbruck (AT), University Hospital of Basel (CH), Institut für Rechtsmedizin der Universität Basel (CH)
Openalex Percentile: Top 14%
Advanced Neuroimaging Techniques and Applications
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Laika access coming soon