The genetic basis of extra-lobed leaves in ivyleaf morning glory (Ipomoea hederacea)

Intraspecific leaf shape variation is common among angiosperms. Ivyleaf morning glory ( Ipomoea hederacea ) has become a useful system for studying the genetics and ecology of leaf shape variation as this species exhibits two leaf shapes: leaves with entire margins, and 3-lobed leaves. It is known that these phenotypes are controlled by a single locus, and differ in their ecophysiology, geographic distribution, ecology, and fitness. However, individuals producing leaves with 1-2 extra lobes have also been observed, but the genetic basis of these phenotypes have not been described. To investigate the genetic basis of extra-lobing, we compared phenotypic distributions of leaf shapes of an F2 generation to Mendelian ratios for a single locus trait, and conducted a bulked segregant analysis to uncover quantitative trait loci. Our results suggest that producing extra-lobed leaves has a complex genetic basis and that there are multiple QTLs underlying this phenotype containing potential candidate genes involved with auxin distribution and leaf development. Whether these extra-lobed phenotypes also differ in terms of their physiology and ecology remains unexplored.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-11-02
DOI
https://doi.org/10.64898/2026.10.27.762295
Primary Topic
Genetic Mapping and Diversity in Plants and Animals
Type
preprint
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The genetic basis of extra-lobed leaves in ivyleaf morning glory (Ipomoea hederacea)

John R. Stinchcombe, Amanda L. Peake, Damian J. Hernandez, Emily Glasgow et al.
bioRxiv (Cold Spring Harbor Laboratory)
Genetic Mapping and Diversity in Plants and Animals
preprint

The genetic basis of extra-lobed leaves in ivyleaf morning glory (Ipomoea hederacea)

John R. Stinchcombe, Amanda L. Peake, Damian J. Hernandez, Emily Glasgow, Martin Henry, Margaret Li
preprint en

Abstract

Intraspecific leaf shape variation is common among angiosperms. Ivyleaf morning glory ( Ipomoea hederacea ) has become a useful system for studying the genetics and ecology of leaf shape variation as this species exhibits two leaf shapes: leaves with entire margins, and 3-lobed leaves. It is known that these phenotypes are controlled by a single locus, and differ in their ecophysiology, geographic distribution, ecology, and fitness. However, individuals producing leaves with 1-2 extra lobes have also been observed, but the genetic basis of these phenotypes have not been described. To investigate the genetic basis of extra-lobing, we compared phenotypic distributions of leaf shapes of an F2 generation to Mendelian ratios for a single locus trait, and conducted a bulked segregant analysis to uncover quantitative trait loci. Our results suggest that producing extra-lobed leaves has a complex genetic basis and that there are multiple QTLs underlying this phenotype containing potential candidate genes involved with auxin distribution and leaf development. Whether these extra-lobed phenotypes also differ in terms of their physiology and ecology remains unexplored.

bioRxiv (Cold Spring Harbor Laboratory)
University of Toronto (CA)
Genetic Mapping and Diversity in Plants and Animals
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The genetic basis of extra-lobed leaves in ivyleaf morning glory (Ipomoea hederacea) — John R. Stinchcombe, Amanda L. Peake, et al. · bioRxiv (Cold Spring Harbor Laboratory) (2026) | TGRS Research Map | TGRS