Radial Kernel Attention for Long-Range Modeling in Polymer Machine Learning Force Fields

We introduce Radial Kernel Attention (RKA) for long-range modeling in polymer machine learning force fields. Local neighbor graphs constrain communication across polymer chains and their surrounding environments, while explicit all-pair attention incurs quadratic cost. RKA maps atomic distances from the cluster centroid to learned radial features and combines their overlap with content-dependent queries and keys. Factorized aggregation and readout enable global feature exchange at linear cost in atom count for fixed feature dimensions. We insert the invariant scalar update between EquiformerV3 local blocks and obtain conservative forces by differentiating the total energy, including its radial coordinate dependence. We evaluate energy and force prediction for finite polymer-derived clusters in OPoly26. Our models are trained on the official training split for 12 epochs and evaluated directly after training on the complete official validation split. A matched 5M comparison shows that RKA reduces per-atom energy and force MAEs by 67.4% and 36.3%, respectively. The 20M RKA model is compared with UMA-S-1.2 and UMA-S-1.2.1 on the same validation structures. The 20M model attains a total-energy MAE of 15.81 meV and a force MAE of 2.619 meV/Å; its per-atom energy MAE is 0.1182 meV/atom. RKA provides a compact global communication pathway that improves energy and force prediction on the evaluated polymer-derived clusters.

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Publication Details

Journal
ChemRxiv
Published
2026-11-02
DOI
https://doi.org/10.26434/chemrxiv.15011478/v1
Primary Topic
Machine Learning in Materials Science
Type
preprint
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preprint

Radial Kernel Attention for Long-Range Modeling in Polymer Machine Learning Force Fields

Wenbo Fu, Chengwen Hu, Haifeng Lv, Zhou Lv et al.
2 links
ChemRxiv
Machine Learning in Materials Science
preprint

Radial Kernel Attention for Long-Range Modeling in Polymer Machine Learning Force Fields

Wenbo Fu, Chengwen Hu, Haifeng Lv, Zhou Lv, Chenghui Mao
preprint en

Abstract

We introduce Radial Kernel Attention (RKA) for long-range modeling in polymer machine learning force fields. Local neighbor graphs constrain communication across polymer chains and their surrounding environments, while explicit all-pair attention incurs quadratic cost. RKA maps atomic distances from the cluster centroid to learned radial features and combines their overlap with content-dependent queries and keys. Factorized aggregation and readout enable global feature exchange at linear cost in atom count for fixed feature dimensions. We insert the invariant scalar update between EquiformerV3 local blocks and obtain conservative forces by differentiating the total energy, including its radial coordinate dependence. We evaluate energy and force prediction for finite polymer-derived clusters in OPoly26. Our models are trained on the official training split for 12 epochs and evaluated directly after training on the complete official validation split. A matched 5M comparison shows that RKA reduces per-atom energy and force MAEs by 67.4% and 36.3%, respectively. The 20M RKA model is compared with UMA-S-1.2 and UMA-S-1.2.1 on the same validation structures. The 20M model attains a total-energy MAE of 15.81 meV and a force MAE of 2.619 meV/Å; its per-atom energy MAE is 0.1182 meV/atom. RKA provides a compact global communication pathway that improves energy and force prediction on the evaluated polymer-derived clusters.

ChemRxiv
Machine Learning in Materials Science
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Radial Kernel Attention for Long-Range Modeling in Polymer Machine Learning Force Fields — Wenbo Fu, Chengwen Hu, et al. · ChemRxiv (2026) | TGRS Research Map | TGRS