An On-Premises Multi-Agent Large Language Model With Guideline Retrieval-Augmented Generation and De-Identified PubMed Search for Issue-Driven Treatment Planning in Oral Cancer: Development and Retrospective Pilot Evaluation Study (Preprint)

BACKGROUND Oral cancer treatment planning must reconcile domestic guidelines with emerging evidence and regulatory updates while protecting patient privacy. Cloud-hosted large language models (LLMs) are difficult to deploy in hospitals because of data governance, cost, and misalignment with country-specific rules. OBJECTIVE This study aimed to develop an on-premises, issue-driven multi-agent LLM system (OncoRAG-Oral) that combines local retrieval-augmented generation (RAG) over Japanese guidelines with de-identified PubMed searches, and to evaluate its feasibility retrospectively. METHODS Development proceeded in 2 phases within a hospital intranet. In phase 1, a single-LLM RAG prototype (Qwen3.6-35B-A3B) indexing 6 Japanese oncology guidelines and handling rules was built on a consumer workstation (NVIDIA GeForce RTX 5090; approximately US $5000), and latency was benchmarked on 10 cases. In phase 2, a 5-agent workflow (CrewAI; Gemma 4 26B-A4B on an NVIDIA GB10 Grace Blackwell Superchip) structured the clinical context, extracted clinical issues and missing data, retrieved local guideline and regulatory documents, sent only non-identifying queries to PubMed, and synthesized ranked, source-linked candidates. Reports for 10 consecutive de-identified oral and salivary gland malignancy cases (median age 63, range 41-88 years), some of which had also been used during development, were independently rated by 3 oral and maxillofacial surgeons (24, 14, and 7 years of experience) for treatment-option sufficiency and treatment-planning utility (0-3; score ≥2 prespecified as sufficient or useful) and audited for errors and hallucinations; agreement was quantified by percentage agreement and Fleiss κ. RESULTS In phase 1, the workstation generated approximately 200 tokens/s with a mean end-to-end response time of 4.89 (range 4.15-5.32) seconds per case. In phase 2, the 3 raters assigned identical scores for every case and dimension (Fleiss κ=1.00). Treatment-option sufficiency reached score ≥2 in 10/10 cases (100%) and treatment-planning utility in 9/10 cases (90%). The reports cited 26 unique PubMed-indexed publications, including 4 randomized controlled trials, together with 24 guideline passages and 4 official regulatory documents. The system integrated Japanese guidelines with the KEYNOTE-689 trial and national optimal-use guidance on perioperative pembrolizumab, and flagged a missing biomarker (programmed death-ligand 1 combined positive score) and the uncertainty of extrapolating squamous cell carcinoma trials to adenoid cystic carcinoma. All raters identified 1 prioritization error (1/10, 10%), in which an advanced-stage regimen was ranked first for an early-stage tumor; no fabricated citations were identified by the raters. CONCLUSIONS An on-premises multi-agent LLM system combining local guideline RAG with de-identified literature retrieval was implemented, and 3 co-author surgeons rated its reports useful in 9 of 10 cases. Because evaluation cases overlapped with development and half of the reports were corrected before rating, these findings describe a tuned system rather than performance on independent cases; phase 2 responsiveness, privacy protections, and clinical benefit require blinded, comparative assessment before clinical deployment.

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Publication Details

Published
2026-11-01
DOI
https://doi.org/10.2196/preprints.115902
Primary Topic
Artificial Intelligence in Healthcare and Education
Type
preprint
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preprint

An On-Premises Multi-Agent Large Language Model With Guideline Retrieval-Augmented Generation and De-Identified PubMed Search for Issue-Driven Treatment Planning in Oral Cancer: Development and Retrospective Pilot Evaluation Study (Preprint)

Shin-ichiro Hiraoka, Ryo Akiyama, Susumu Tanaka, Yutaka Itakura et al.
Artificial Intelligence in Healthcare and Education
preprint

An On-Premises Multi-Agent Large Language Model With Guideline Retrieval-Augmented Generation and De-Identified PubMed Search for Issue-Driven Treatment Planning in Oral Cancer: Development and Retrospective Pilot Evaluation Study (Preprint)

Shin-ichiro Hiraoka, Ryo Akiyama, Susumu Tanaka, Yutaka Itakura, Kohei Kawamura
preprint en

Abstract

BACKGROUND Oral cancer treatment planning must reconcile domestic guidelines with emerging evidence and regulatory updates while protecting patient privacy. Cloud-hosted large language models (LLMs) are difficult to deploy in hospitals because of data governance, cost, and misalignment with country-specific rules. OBJECTIVE This study aimed to develop an on-premises, issue-driven multi-agent LLM system (OncoRAG-Oral) that combines local retrieval-augmented generation (RAG) over Japanese guidelines with de-identified PubMed searches, and to evaluate its feasibility retrospectively. METHODS Development proceeded in 2 phases within a hospital intranet. In phase 1, a single-LLM RAG prototype (Qwen3.6-35B-A3B) indexing 6 Japanese oncology guidelines and handling rules was built on a consumer workstation (NVIDIA GeForce RTX 5090; approximately US $5000), and latency was benchmarked on 10 cases. In phase 2, a 5-agent workflow (CrewAI; Gemma 4 26B-A4B on an NVIDIA GB10 Grace Blackwell Superchip) structured the clinical context, extracted clinical issues and missing data, retrieved local guideline and regulatory documents, sent only non-identifying queries to PubMed, and synthesized ranked, source-linked candidates. Reports for 10 consecutive de-identified oral and salivary gland malignancy cases (median age 63, range 41-88 years), some of which had also been used during development, were independently rated by 3 oral and maxillofacial surgeons (24, 14, and 7 years of experience) for treatment-option sufficiency and treatment-planning utility (0-3; score ≥2 prespecified as sufficient or useful) and audited for errors and hallucinations; agreement was quantified by percentage agreement and Fleiss κ. RESULTS In phase 1, the workstation generated approximately 200 tokens/s with a mean end-to-end response time of 4.89 (range 4.15-5.32) seconds per case. In phase 2, the 3 raters assigned identical scores for every case and dimension (Fleiss κ=1.00). Treatment-option sufficiency reached score ≥2 in 10/10 cases (100%) and treatment-planning utility in 9/10 cases (90%). The reports cited 26 unique PubMed-indexed publications, including 4 randomized controlled trials, together with 24 guideline passages and 4 official regulatory documents. The system integrated Japanese guidelines with the KEYNOTE-689 trial and national optimal-use guidance on perioperative pembrolizumab, and flagged a missing biomarker (programmed death-ligand 1 combined positive score) and the uncertainty of extrapolating squamous cell carcinoma trials to adenoid cystic carcinoma. All raters identified 1 prioritization error (1/10, 10%), in which an advanced-stage regimen was ranked first for an early-stage tumor; no fabricated citations were identified by the raters. CONCLUSIONS An on-premises multi-agent LLM system combining local guideline RAG with de-identified literature retrieval was implemented, and 3 co-author surgeons rated its reports useful in 9 of 10 cases. Because evaluation cases overlapped with development and half of the reports were corrected before rating, these findings describe a tuned system rather than performance on independent cases; phase 2 responsiveness, privacy protections, and clinical benefit require blinded, comparative assessment before clinical deployment.

Artificial Intelligence in Healthcare and Education
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