SJIP38 : A single‐tube 38‐parameter spectral immunophenotyping panel for the lineage classification of pediatric leukemias

Flow cytometric immunophenotyping is central to the diagnosis and classification of pediatric leukemia but traditionally requires multiple tubes to evaluate the breadth of markers needed for lineage assignment and disease characterization. Here, we describe the development of a 38-parameter spectral flow cytometry immunophenotyping panel (SJIP38) for lineage classification of pediatric leukemias. The panel was designed for the initial evaluation of suspected de novo or relapsed acute leukemia in pediatric patients and consolidates markers previously distributed across a 13-tube conventional assay into a single high-dimensional spectral panel. The assay was designed to preserve established diagnostic markers, reduce sample requirements and tube number, and expand immunophenotypic resolution. Development was performed on the Sony ID7000 six-laser spectral cytometry platform using a systematic fluorochrome selection strategy guided by spillover spread characteristics, antigen density, and commercial availability of conjugated reagents. The resulting panel enables simultaneous assessment of lineage-defining, maturation-associated, and aberrantly expressed antigens across multiple pediatric leukemia subtypes. In addition to supporting routine diagnostic immunophenotyping, SJIP38 establishes a standardized fluorochrome palette and marker framework for future spectral assays, including measurable residual disease and expanded hematological malignancy panels.

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Publication Details

Journal
Cytometry Part B Clinical Cytometry
Published
2026-10-31
DOI
https://doi.org/10.1002/cyto.b.70080
Primary Topic
Acute Lymphoblastic Leukemia research
Type
article
Field-Weighted Citation Impact
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article

SJIP38 : A single‐tube 38‐parameter spectral immunophenotyping panel for the lineage classification of pediatric leukemias

Mahsa Khanlari, Christy C. Embrey, Jeffery M. Klco, Laura Key et al.
Cytometry Part B Clinical Cytometry
Acute Lymphoblastic Leukemia research
article

SJIP38 : A single‐tube 38‐parameter spectral immunophenotyping panel for the lineage classification of pediatric leukemias

Mahsa Khanlari, Christy C. Embrey, Jeffery M. Klco, Laura Key, Yen‐Chun Liu, Stacie Woolard, Zhaohong Yin, Paul E. Mead, Peixin Liu, Priya Kumar
article en

Abstract

Flow cytometric immunophenotyping is central to the diagnosis and classification of pediatric leukemia but traditionally requires multiple tubes to evaluate the breadth of markers needed for lineage assignment and disease characterization. Here, we describe the development of a 38-parameter spectral flow cytometry immunophenotyping panel (SJIP38) for lineage classification of pediatric leukemias. The panel was designed for the initial evaluation of suspected de novo or relapsed acute leukemia in pediatric patients and consolidates markers previously distributed across a 13-tube conventional assay into a single high-dimensional spectral panel. The assay was designed to preserve established diagnostic markers, reduce sample requirements and tube number, and expand immunophenotypic resolution. Development was performed on the Sony ID7000 six-laser spectral cytometry platform using a systematic fluorochrome selection strategy guided by spillover spread characteristics, antigen density, and commercial availability of conjugated reagents. The resulting panel enables simultaneous assessment of lineage-defining, maturation-associated, and aberrantly expressed antigens across multiple pediatric leukemia subtypes. In addition to supporting routine diagnostic immunophenotyping, SJIP38 establishes a standardized fluorochrome palette and marker framework for future spectral assays, including measurable residual disease and expanded hematological malignancy panels.

Cytometry Part B Clinical Cytometry
St. Jude Children's Research Hospital (US)
Openalex Percentile: Top 10%
Acute Lymphoblastic Leukemia research
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