Exploratory analysis of relevant circRNA-mediated ceRNA networks in left ventricular cardiac tissue and liquid biopsy of heart failure individuals
Heart failure (HF) is a complex cardiovascular syndrome characterized by extensive molecular remodeling involving coding and non-coding RNAs. Among these, circular RNAs (circRNAs) have been proposed as potential regulators of gene expression, through competing endogenous RNA (ceRNA)-like mechanisms. In this study, we performed an integrative transcriptomic analysis using publicly available cardiac tissue RNA-seq datasets to identify differentially expressed circRNAs, miRNAs, and mRNAs associated with HF. Predicted RNA-RNA interactions were used to assemble putative circRNA-mediated ceRNA networks, followed by functional enrichment analyses to highlight biologically relevant pathways and molecular axes. In parallel, selected network components were evaluated by RT-qPCR in an independent, non-phenotype-matched plasma cohort, as an exploratory assessment of circulating expression patterns. Differential expression analyses identified multiple dysregulated RNAs associated with inflammatory signaling, cardiac remodeling, and calcium-related pathways. Integrative network analysis suggested the circMYH7_0072/hsa-let-7i-5p/ KCNN4 axis as a putative regulatory interaction potentially associated with HF-related molecular remodeling. Among the evaluated candidates, circMYH7_0072 was the only transcript that retained statistical significance after sex-, age- and pharmacological-adjusted regression and FDR correction in the exploratory plasma cohort. Given the demographic and clinical imbalance of this cohort, this finding should be interpreted as a hypothesis-generating result. Collectively, these findings are consistent with the potential involvement of circRNA-mediated regulatory networks in HF, although additional validation will be necessary to confirm their biological and translational relevance.
Authors
- Nicolás Saavedra (ORCID: https://orcid.org/0000-0002-3334-5107)
- Vinicius Maracaja‐Coutinho (ORCID: https://orcid.org/0000-0002-8873-9381)
- Sebastián Urquiza-Zurich (ORCID: https://orcid.org/0000-0002-8064-330X)
- Carmen G. Ubilla
- Sergio Lavandero (ORCID: https://orcid.org/0000-0003-4258-1483)
- Isis Páez
- Juan Pablo Silva (ORCID: https://orcid.org/0000-0001-9077-1121)
- Camilo Rebolledo (ORCID: https://orcid.org/0000-0001-7160-6331)
- Luis Antonio Salazar (ORCID: https://orcid.org/0000-0002-5112-6944)
- Montserrat Hevia
- Francisca Villagran
Institutions
- Universidad de La Frontera (CL)
- Universidad San Sebastián (CL)
- Advanced Center for Chronic Diseases (CL)
- Instituto Gonçalo Moniz (BR)
- Fundação Oswaldo Cruz (BR)
- University of Chile (CL)
- The University of Texas Southwestern Medical Center (US)
Publication Details
- Journal
- Biology Direct
- Published
- 2026-10-31
- DOI
- https://doi.org/10.1186/s13062-026-00896-z
- Primary Topic
- Circular RNAs in diseases
- Type
- article
- Field-Weighted Citation Impact
- 0.00