Standarisasi Analisis Histomorfometri Kerapatan Kolagen Menggunakan ImageJ sebagai Upaya Peningkatan Mutu Penelitian Mahasiswa di Laboratorium Biomedik Kedokteran Gigi

Histomorphometric analysis of collagen density is widely used in dental biomedical research; however, visual assessment is susceptible to interobserver variation. This study developed, implemented, and evaluated a standardized ImageJ based protocol for collagen density histomorphometry in a dental biomedical laboratory. This descriptive quantitative implementation study comprised standard operating procedure (SOP) development, observer training, and implementation using Masson’s Trichrome-stained histological specimens. Images were calibrated, processed by color deconvolution and thresholding, and measured as collagen area fraction. Interobserver reliability was evaluated using the intraclass correlation coefficient (ICC). The SOP was implemented in all specimens. The mean collagen density was 38.87 ±3.59%, with an ICC of 0.87 (95% confidence interval: 0.79-0.93), indicating good interobserver reliability. The mean analysis time decreased from 15-20 minutes with the manual method to 3-5 minutes using ImageJ. ImageJ-based analysis and the SOP were adopted in 85% and 83% of student research projects, respectively. The standardized ImageJ based protocol demonstrated good reliability, improved analytical efficiency, and supported laboratory quality assurance. It is applicable for standardized histological analysis in dental biomedical laboratory education.

Authors

Publication Details

Journal
STOMATOGNATIC - Jurnal Kedokteran Gigi
Published
2026-10-29
DOI
https://doi.org/10.19184/stoma.v23i2.60026
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Standarisasi Analisis Histomorfometri Kerapatan Kolagen Menggunakan ImageJ sebagai Upaya Peningkatan Mutu Penelitian Mahasiswa di Laboratorium Biomedik Kedokteran Gigi

Happy Harmono, Bagus Setiawan, Sri Wahyuningsih
STOMATOGNATIC - Jurnal Kedokteran Gigi
Cell Image Analysis Techniques
article

Standarisasi Analisis Histomorfometri Kerapatan Kolagen Menggunakan ImageJ sebagai Upaya Peningkatan Mutu Penelitian Mahasiswa di Laboratorium Biomedik Kedokteran Gigi

Happy Harmono, Bagus Setiawan, Sri Wahyuningsih
article en

Abstract

Histomorphometric analysis of collagen density is widely used in dental biomedical research; however, visual assessment is susceptible to interobserver variation. This study developed, implemented, and evaluated a standardized ImageJ based protocol for collagen density histomorphometry in a dental biomedical laboratory. This descriptive quantitative implementation study comprised standard operating procedure (SOP) development, observer training, and implementation using Masson’s Trichrome-stained histological specimens. Images were calibrated, processed by color deconvolution and thresholding, and measured as collagen area fraction. Interobserver reliability was evaluated using the intraclass correlation coefficient (ICC). The SOP was implemented in all specimens. The mean collagen density was 38.87 ±3.59%, with an ICC of 0.87 (95% confidence interval: 0.79-0.93), indicating good interobserver reliability. The mean analysis time decreased from 15-20 minutes with the manual method to 3-5 minutes using ImageJ. ImageJ-based analysis and the SOP were adopted in 85% and 83% of student research projects, respectively. The standardized ImageJ based protocol demonstrated good reliability, improved analytical efficiency, and supported laboratory quality assurance. It is applicable for standardized histological analysis in dental biomedical laboratory education.

STOMATOGNATIC - Jurnal Kedokteran GigiVol. 23(2)
Openalex Percentile: Top 19%
Cell Image Analysis Techniques
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Laika access coming soon
Standarisasi Analisis Histomorfometri Kerapatan Kolagen Menggunakan ImageJ sebagai Upaya Peningkatan Mutu Penelitian Mahasiswa di Laboratorium Biomedik Kedokteran Gigi — Happy Harmono, Bagus Setiawan, et al. · STOMATOGNATIC - Jurnal Kedokteran Gigi (2026) | TGRS Research Map | TGRS