DINOv2 for PET: A Pre-Training Domain Benchmark Across Classification, Segmentation, and Prognosis

DINO (self-DIstillation with NO labels) has become a stan- dard for self-supervised pre-training, producing features that generalise across datasets and downstream tasks. In medical imaging it has been adopted mainly for radiology (X-ray, CT and MRI), where even natural- image DINO features transfer well. In the literature, these features have been reported to transfer worse to functional imaging such as PET. Yet PET-specific DINO models have barely been introduced, and even less validated across multiple tasks and datasets. We present PET-DINOv2-2D, the first DINOv2 model pre-trained on 2D PET, and benchmark it against open-source encoders: the origi- nal DINOv2 (pre-trained on the LVD-142M natural-image dataset) and OmniRad (pre-trained on CT, MRI and ultrasound). Using the same lightweight heads for every backbone, and despite far less pre-training data, PET-DINOv2-2D matches or outperforms both on three down- stream PET tasks: normal/abnormal classification, lesion segmentation and recurrence-free survival prognosis. Its advantage is largest when few labels are available, suggesting that PET pre-training gives more transferable, label-efficient features. Code is made available at https://github.com/nuclivision/pet-dinov2-2d/.

Authors

Publication Details

Journal
arXiv (Cornell University)
Published
2026-10-29
DOI
https://doi.org/10.48550/arxiv.2610.40018
Primary Topic
Domain Adaptation and Few-Shot Learning
Type
preprint
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preprint

DINOv2 for PET: A Pre-Training Domain Benchmark Across Classification, Segmentation, and Prognosis

Simon DeKeyser, Jef Vandemeulebroucke, Maarten Larmuseau, Vicky De Ridder et al.
arXiv (Cornell University)
Domain Adaptation and Few-Shot Learning
preprint

DINOv2 for PET: A Pre-Training Domain Benchmark Across Classification, Segmentation, and Prognosis

Simon DeKeyser, Jef Vandemeulebroucke, Maarten Larmuseau, Vicky De Ridder, Yannick Brackenier, Roxanne De Maeyer
preprint en

Abstract

DINO (self-DIstillation with NO labels) has become a stan- dard for self-supervised pre-training, producing features that generalise across datasets and downstream tasks. In medical imaging it has been adopted mainly for radiology (X-ray, CT and MRI), where even natural- image DINO features transfer well. In the literature, these features have been reported to transfer worse to functional imaging such as PET. Yet PET-specific DINO models have barely been introduced, and even less validated across multiple tasks and datasets. We present PET-DINOv2-2D, the first DINOv2 model pre-trained on 2D PET, and benchmark it against open-source encoders: the origi- nal DINOv2 (pre-trained on the LVD-142M natural-image dataset) and OmniRad (pre-trained on CT, MRI and ultrasound). Using the same lightweight heads for every backbone, and despite far less pre-training data, PET-DINOv2-2D matches or outperforms both on three down- stream PET tasks: normal/abnormal classification, lesion segmentation and recurrence-free survival prognosis. Its advantage is largest when few labels are available, suggesting that PET pre-training gives more transferable, label-efficient features. Code is made available at https://github.com/nuclivision/pet-dinov2-2d/.

arXiv (Cornell University)
Domain Adaptation and Few-Shot Learning
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