New Citrinin and Coumarin Derivatives from a Marine-Derived Penicillium sp. RCDB006

Abstract One new citrinin derivative (1) and four new coumarins (2–5), along with seven known compounds, were isolated from a deep-sea-derived fungus Penicillium sp. RCDB006 in the sediments of the Diamantina Fracture Zone, the second deepest trench in the Indian Ocean. Comprehensive spectroscopic analyses (NMR and HRESIMS) established the planar structures. Furthermore, the absolute configurations of compounds 1–5 were assigned by comparing experimental and calculated ECD data, alongside X-ray crystallographic analysis. These compounds were evaluated for antibacterial and antiproliferative activities against a panel of Gram-positive and Gram-negative bacteria, as well as two cancer cell lines. Compound 9 exhibited modest bactericidal activity and also inhibited the growth of human acute myeloid leukemia (MV4–11) and colorectal cancer (SW620) cells with IC50 values of 34.36 and 36.50 μM, respectively.

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Publication Details

Journal
ACS Omega
Published
2026-10-29
DOI
https://doi.org/10.1021/acsomega.6c05300
Primary Topic
Microbial Natural Products and Biosynthesis
Type
article
Field-Weighted Citation Impact
0.00

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article

New Citrinin and Coumarin Derivatives from a Marine-Derived Penicillium sp. RCDB006

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ACS Omega
Microbial Natural Products and Biosynthesis
article

New Citrinin and Coumarin Derivatives from a Marine-Derived Penicillium sp. RCDB006

Cai‐Guang Yang, Lingbin Lin, Yihui Pan, Wenjia Huang, Yangrong Zhao, Junfeng Wang, Ming‐Wei Wang, Wu Ruan, Wei Wu, Qun Li, Guangli Deng, Yi Chen, Xiaozhen Wang
article en

Abstract

Abstract One new citrinin derivative (1) and four new coumarins (2–5), along with seven known compounds, were isolated from a deep-sea-derived fungus Penicillium sp. RCDB006 in the sediments of the Diamantina Fracture Zone, the second deepest trench in the Indian Ocean. Comprehensive spectroscopic analyses (NMR and HRESIMS) established the planar structures. Furthermore, the absolute configurations of compounds 1–5 were assigned by comparing experimental and calculated ECD data, alongside X-ray crystallographic analysis. These compounds were evaluated for antibacterial and antiproliferative activities against a panel of Gram-positive and Gram-negative bacteria, as well as two cancer cell lines. Compound 9 exhibited modest bactericidal activity and also inhibited the growth of human acute myeloid leukemia (MV4–11) and colorectal cancer (SW620) cells with IC50 values of 34.36 and 36.50 μM, respectively.

ACS Omega
Shanghai Jiao Tong University (CN), Chinese Academy of Sciences (CN), Fudan University (CN), Hainan Medical University (CN)
Wuhan University of Technology
Openalex Percentile: Top 14%
Microbial Natural Products and Biosynthesis
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