Amoxicillin Worsens Mortality from Viral Respiratory Tract Infection

Influenza infections are common and result in substantial mortality, with secondary bacterial pneumonias contributing to worse outcomes. To prevent mortality associated with bacterial co-infections, antibiotics are often prescribed in the absence of microbiological data. Currently, there are conflicting society recommendations on antibiotic utilization in viral respiratory tract infections as we lack prospective studies to guide treatment. We developed an animal model to study the effects of antibiotic exposure during influenza infection. Our results suggest that amoxicillin started during influenza A infection increases mortality from influenza A and increases severity of secondary bacterial pneumonia, and this is more pronounced in males.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-10-29
DOI
https://doi.org/10.64898/2026.10.27.762283
Primary Topic
Influenza Virus Research Studies
Type
preprint
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preprint

Amoxicillin Worsens Mortality from Viral Respiratory Tract Infection

Sarah Elizabeth Clark, Sam Fulte, Sara N. Stoner, Steven C. Shaw et al.
2 links
bioRxiv (Cold Spring Harbor Laboratory)
Influenza Virus Research Studies
preprint

Amoxicillin Worsens Mortality from Viral Respiratory Tract Infection

Sarah Elizabeth Clark, Sam Fulte, Sara N. Stoner, Steven C. Shaw, William J. Janssen, Marika Orlov
preprint en

Abstract

Influenza infections are common and result in substantial mortality, with secondary bacterial pneumonias contributing to worse outcomes. To prevent mortality associated with bacterial co-infections, antibiotics are often prescribed in the absence of microbiological data. Currently, there are conflicting society recommendations on antibiotic utilization in viral respiratory tract infections as we lack prospective studies to guide treatment. We developed an animal model to study the effects of antibiotic exposure during influenza infection. Our results suggest that amoxicillin started during influenza A infection increases mortality from influenza A and increases severity of secondary bacterial pneumonia, and this is more pronounced in males.

bioRxiv (Cold Spring Harbor Laboratory)
University of Colorado System (US), National Jewish Health (US), University of Colorado Anschutz Medical Campus (US), University of Colorado Denver (US)
Good health and well-being
Influenza Virus Research Studies
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