Progressively Refining SAM for Accurate Phytoplankton Segmentation

Accurate phytoplankton segmentation is essential for ecological monitoring, yet it remains largely underexplored due to the subtle visual characteristics of phytoplankton and the scarcity of pixel-level annotations. To address these challenges, we propose PhySeg, a SAM-based segmentation framework equipped with a lightweight refinement module that progressively restores fine-grained details through multi-scale feature fusion. In addition, we construct a phytoplankton segmentation dataset by manually annotating instance-level masks for an existing dataset, providing a valuable resource for future research. Experimental results demonstrate that PhySeg improves segmentation accuracy, validating the effectiveness of the proposed module. Code is available at https://github.com/lijialin404/PhySeg.

Authors

Publication Details

Journal
arXiv (Cornell University)
Published
2026-10-27
DOI
https://doi.org/10.48550/arxiv.2610.36722
Primary Topic
Advanced Neural Network Applications
Type
preprint
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preprint

Progressively Refining SAM for Accurate Phytoplankton Segmentation

Yuezun Li, Jialin Li, Junyu Dong, Jinkun Jiang
arXiv (Cornell University)
Advanced Neural Network Applications
preprint

Progressively Refining SAM for Accurate Phytoplankton Segmentation

Yuezun Li, Jialin Li, Junyu Dong, Jinkun Jiang
preprint en

Abstract

Accurate phytoplankton segmentation is essential for ecological monitoring, yet it remains largely underexplored due to the subtle visual characteristics of phytoplankton and the scarcity of pixel-level annotations. To address these challenges, we propose PhySeg, a SAM-based segmentation framework equipped with a lightweight refinement module that progressively restores fine-grained details through multi-scale feature fusion. In addition, we construct a phytoplankton segmentation dataset by manually annotating instance-level masks for an existing dataset, providing a valuable resource for future research. Experimental results demonstrate that PhySeg improves segmentation accuracy, validating the effectiveness of the proposed module. Code is available at https://github.com/lijialin404/PhySeg.

arXiv (Cornell University)
Advanced Neural Network Applications
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