Role of allostery in ligand binding modulated mechanical responses of calmodulin domain
Abstract Calmodulin (CaM), a central Ca2+ sensor in eukaryotic cells, exhibits Ca2+-regulated conformational transitions that are strongly influenced by mechanical stress. Single-molecule experiments have revealed a nonmonotonic dependence of the unfolding transition-state distance δx‡ on Ca2+ concentration, yet the underlying microscopic mechanism remains elusive. Here, using a dynamic energy-landscape model combined with largescale coarse-grained molecular dynamics simulations, we elucidate how Ca2+ concentration and mechanical tension jointly shape the unfolding pathway of CaM domain. At low Ca2+ concentrations, the reduction in δx‡ arises from a redistribution within the folded ensemble between closed and open conformations. At moderate and high Ca2+ concentrations, the subsequent increase in δx‡ originates from substantial Ca2+-dependent modifications of the unfolding transition-state ensemble. Moreover, our simulations predict that mechanical tension enhances Ca2+-binding affinity, revealing a counterintuitive force-induced stabilization effect. Together, these findings provide a microscopic explanation for the experimentally observed tension-Ca2+ coupling and offer a unified physical framework for understanding the mechanosensitive functional regulation of CaM.
Authors
- Weitong Ren (ORCID: https://orcid.org/0000-0001-8889-4587)
- Yunqiang Bian (ORCID: https://orcid.org/0000-0002-7316-8301)
- Yajing Wang (ORCID: https://orcid.org/0000-0002-1326-1459)
- Xiulian 秀莲 Xu 徐 (ORCID: https://orcid.org/0000-0001-7635-6511)
- Yichao Wu (ORCID: https://orcid.org/0009-0005-6754-9086)
- Wei Wang
Institutions
- Chinese Academy of Sciences (CN)
- University of Chinese Academy of Sciences (CN)
- Wenzhou Institute, University of Chinese Academy of Sciences (CN)
- Yangzhou University (CN)
- Nanjing University (CN)
Publication Details
- Journal
- Communications in Theoretical Physics
- Published
- 2026-10-28
- DOI
- https://doi.org/10.1088/1572-9494/aeba85
- Primary Topic
- Protein Structure and Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Natural Science Foundation of China
- Chinese Academy of Sciences
- Nanjing University
- Basic Research Program of Jiangsu Province
- Wenzhou Institute of Biomaterials and Engineering