Information coding strategies in biological reservoir computing for multiclass time-series classification

Physical reservoir computing (RC) using biological neural networks (BNNs) offers a framework for probing how high-dimensional dynamics arising from multicellular systems support complex information processing in the brain. However, how electrical inputs and extracellular readouts should be designed to suit different task demands remains unclear. Here, using primary rat cortical neurons cultured on a high-density microelectrode array, we investigated how input encoding and spike detection methods influence neural representations and the resulting RC performance in BNNs. Comparison of pulse amplitude modulation and latency coding revealed that the latter exhibited superior performance in demanding multiclass conditions, including a 10% improvement in a 10-class spoken digit classification task. Spike sorting further improved classification performance by enhancing class separability, while largely preserving the low-dimensional structure of population activity. These findings highlight the importance of designing information coding strategies according to task difficulty.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-10-27
DOI
https://doi.org/10.64898/2026.10.22.755221
Primary Topic
Neural Networks and Reservoir Computing
Type
preprint

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preprint

Information coding strategies in biological reservoir computing for multiclass time-series classification

Yuichi Katori, Hideaki Yamamoto, Shigeo Sato, Yusei Nishi
2 links
bioRxiv (Cold Spring Harbor Laboratory)
Neural Networks and Reservoir Computing
preprint

Information coding strategies in biological reservoir computing for multiclass time-series classification

Yuichi Katori, Hideaki Yamamoto, Shigeo Sato, Yusei Nishi
preprint en

Abstract

Physical reservoir computing (RC) using biological neural networks (BNNs) offers a framework for probing how high-dimensional dynamics arising from multicellular systems support complex information processing in the brain. However, how electrical inputs and extracellular readouts should be designed to suit different task demands remains unclear. Here, using primary rat cortical neurons cultured on a high-density microelectrode array, we investigated how input encoding and spike detection methods influence neural representations and the resulting RC performance in BNNs. Comparison of pulse amplitude modulation and latency coding revealed that the latter exhibited superior performance in demanding multiclass conditions, including a 10% improvement in a 10-class spoken digit classification task. Spike sorting further improved classification performance by enhancing class separability, while largely preserving the low-dimensional structure of population activity. These findings highlight the importance of designing information coding strategies according to task difficulty.

bioRxiv (Cold Spring Harbor Laboratory)
Tohoku University (JP), Future University Hakodate (JP)
Ministry of Education, Culture, Sports, Science and Technology, Tohoku University, Japan Society for the Promotion of Science, Japan Science and Technology Agency, Research Institute of Electrical Communication, Tohoku University, Core Research for Evolutional Science and Technology, Advanced Low Carbon Technology Research and Development Program
Neural Networks and Reservoir Computing
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