MedVTok: A General-Purpose Medical Visual Tokenizer
Multimodal medical AI requires a common visual interface for encoding heterogeneous imaging evidence for patient condition modeling. However, existing medical visual tokenizers are often tied to a specific dimension and imaging modality, forcing multimodal systems to rely on fragmented and poorly reusable representations. We introduce MedVTok, a general-purpose visual tokenizer that maps 2D images and 3D volumes from diverse imaging modalities into a unified token space. Building such a tokenizer poses two key challenges: preserving anatomical structure across dimensions and capturing clinical semantics across modalities. To this end, MedVTok introduces (i) slice differential regularization, which explicitly models inter-slice anatomical coherence missing in previous per-pixel/per-voxel supervision, and (ii) multi-expert representation alignment, which integrates knowledge from multiple medical expert encoders while retaining modality-specific complementary knowledge. Trained on 28M images and 70K volumes across 9 imaging modalities, MedVTok supports classification, retrieval, segmentation, synthesis, visual question answering, and medical report generation through a single tokenizer. Across 24 benchmarks, MedVTok achieves state-of-the-art performance, demonstrating a scalable token interface that unifies medical image dimension, modality, and task usage.
Authors
- Zongyuan Ge (ORCID: https://orcid.org/0000-0002-5880-8673)
- Diping Song (ORCID: https://orcid.org/0000-0002-5413-7702)
- Hongming Shan (ORCID: https://orcid.org/0000-0002-0604-3197)
- Junzhi Ning
- Shaohao Rui (ORCID: https://orcid.org/0009-0005-2991-9920)
- Yuanfeng Ji
- Wenhao Tang
- Cheng Tang
- Wei Li
- Zilong Li
- Jiyao Liu
- Wenjie Li
- Ying Chen
- Chenglong Ma
- Ming Hu
- Shujian Gao
- Jin Ye
- Junjun He
- Yujie Wei
- Yujie Zhang
- Chaoyang Zhang
Publication Details
- Journal
- arXiv (Cornell University)
- Published
- 2026-10-26
- DOI
- https://doi.org/10.48550/arxiv.2610.35842
- Primary Topic
- Multimodal Machine Learning Applications
- Type
- preprint