Active infrared absorption by photosynthetic intermediates. Photosynthesis as a biochemical Partridge test: can a prepared reaction-centre state control a neighbour's energy loss?

When an emitter and an absorber are coupled, the rate at which the emitter loses energy depends on the absorber's prepared state. Photosynthesis shows this every day: closing photosystem-II reaction centres lengthens antenna fluorescence four- to sixfold, closed purple-bacterial centres quench their LH1 antenna, and the oxidized P700+ of photosystem I quenches the long-wavelength emission of its red chlorophylls. We ask whether such prepared states can also accept mid-infrared energy from a neighbour, and whether that energy can be used rather than wasted. The long-lived P700+ (about 0.1 s, broad mid-infrared absorption) and a W(CO)6 membrane donor (120 ps at 1980 cm^-1) form a concrete first pair, with conditional Förster radii of 1.2–1.75 nm; band strength and donor geometry are the decisive missing inputs (a measured/assumed/missing table is given). A branching and turnover model shows that infrared can change reaction pathways before it thermalizes, as infrared push pulses already do in solar cells, but that higher yield per photon is not higher throughput or efficiency. Thermal energy demonstrably assists productive photochemistry (far-red oxygen evolution with an activation energy close to the uphill gap, 0.13–0.15 eV, i.e. 8–10 µm quanta inside the atmospheric window), and repeated thermally assisted visits explain how sparsely populated upper states still trap efficiently. An energy ledger from public photo-calorespirometry data (independently re-integrated) shows net chemical storage of 1.8–2.9% of the optical input and large net heat release: local thermal uptake can coexist with overall heating, and no refrigeration is established. The paper gives experiments A (infrared Förster test near a switched P700), B (a later-state test in chlorophyll fluorescence with a fixed, hashed record before a fresh random choice — a recorded-choice test at rung 4-C of the CPT ladder), C (an infrared action spectrum of terminal yield), and D/D' (infrared spectrum at fixed leaf temperature; sky versus cold plate), with controls, reviewer upgrades and a tiered plan. Claims are graded: prepared IR-active intermediates (supported); prepared acceptors changing neighbouring emission and thermally assisted photochemistry (observed); local donor cooling (plausible, to be demonstrated); improved chemistry or whole-system cooling (unestablished). Companion to the Partridge-test series and the two-boundary programme.

Authors

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-10-27
DOI
https://doi.org/10.5281/zenodo.23691449
Primary Topic
Photosynthetic Processes and Mechanisms
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Active infrared absorption by photosynthetic intermediates. Photosynthesis as a biochemical Partridge test: can a prepared reaction-centre state control a neighbour's energy loss?

Jarek Duda
Zenodo (CERN European Organization for Nuclear Research)
Photosynthetic Processes and Mechanisms
article

Active infrared absorption by photosynthetic intermediates. Photosynthesis as a biochemical Partridge test: can a prepared reaction-centre state control a neighbour's energy loss?

Jarek Duda
article en

Abstract

When an emitter and an absorber are coupled, the rate at which the emitter loses energy depends on the absorber's prepared state. Photosynthesis shows this every day: closing photosystem-II reaction centres lengthens antenna fluorescence four- to sixfold, closed purple-bacterial centres quench their LH1 antenna, and the oxidized P700+ of photosystem I quenches the long-wavelength emission of its red chlorophylls. We ask whether such prepared states can also accept mid-infrared energy from a neighbour, and whether that energy can be used rather than wasted. The long-lived P700+ (about 0.1 s, broad mid-infrared absorption) and a W(CO)6 membrane donor (120 ps at 1980 cm^-1) form a concrete first pair, with conditional Förster radii of 1.2–1.75 nm; band strength and donor geometry are the decisive missing inputs (a measured/assumed/missing table is given). A branching and turnover model shows that infrared can change reaction pathways before it thermalizes, as infrared push pulses already do in solar cells, but that higher yield per photon is not higher throughput or efficiency. Thermal energy demonstrably assists productive photochemistry (far-red oxygen evolution with an activation energy close to the uphill gap, 0.13–0.15 eV, i.e. 8–10 µm quanta inside the atmospheric window), and repeated thermally assisted visits explain how sparsely populated upper states still trap efficiently. An energy ledger from public photo-calorespirometry data (independently re-integrated) shows net chemical storage of 1.8–2.9% of the optical input and large net heat release: local thermal uptake can coexist with overall heating, and no refrigeration is established. The paper gives experiments A (infrared Förster test near a switched P700), B (a later-state test in chlorophyll fluorescence with a fixed, hashed record before a fresh random choice — a recorded-choice test at rung 4-C of the CPT ladder), C (an infrared action spectrum of terminal yield), and D/D' (infrared spectrum at fixed leaf temperature; sky versus cold plate), with controls, reviewer upgrades and a tiered plan. Claims are graded: prepared IR-active intermediates (supported); prepared acceptors changing neighbouring emission and thermally assisted photochemistry (observed); local donor cooling (plausible, to be demonstrated); improved chemistry or whole-system cooling (unestablished). Companion to the Partridge-test series and the two-boundary programme.

Zenodo (CERN European Organization for Nuclear Research)
Openalex Percentile: Top 22%
Photosynthetic Processes and Mechanisms
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Laika access coming soon