End-to-end automation of behavioural experiments with a collaborative robot

Reliable behavioural measurement is critical to neuroscience discovery, but end-to-end automation of experiments using live animals is challenging. Preparation and transfer of live animals into and out of behavioural assays require skilled, dexterous, gentle and consistent handling. This is difficult to achieve without bespoke automation systems, which resist wide adoption. We present STELA, a robotic cell featuring off-the-shelf collaborative robot (cobot) that autonomously runs the complete workflow of a Drosophila behaviour experiment, from vial to data. Designed to emulate human routine fly laboratory procedures in human workspace, it performs manipulation of fly culture vials, CO2 fly anaesthesia, vision-guided sex classification, single live fly manipulation, and loading and disassembly of a behaviour assay, all in a programmed loop. In 24-h working day, STELA completed 16 experiments (1024 individual visual learning assays in flies) compared to the human who, in an 8-hour working day, completed 6 (384 assays). Retention of flies fit for analysis was similar (93.85% versus 83.33%, respectively), but with 12-fold improvement in handling consistency by the robot. In biologically matched behaviour experiments, robotic and manual handling resulted in the same mean fly behavioural outcomes, yet the robot significantly reduced inter-individual variability in baseline and learning behaviours. STELA demonstrates that it is possible to deploy standard robotic systems to flexibly automate one of the most challenging animal experiments. It provides a low-variance, high-throughput platform for scalable experimentation, and a path to closed-loop, democratized robotic acceleration of experimental discovery.

Authors

Institutions

Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-10-26
DOI
https://doi.org/10.64898/2026.10.20.758951
Primary Topic
Neurobiology and Insect Physiology Research
Type
preprint
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
preprint

End-to-end automation of behavioural experiments with a collaborative robot

Riddha Manna, Ana Marija Jakšić, Ivan Tomić, Tomislav Stampar
bioRxiv (Cold Spring Harbor Laboratory)
Neurobiology and Insect Physiology Research
preprint

End-to-end automation of behavioural experiments with a collaborative robot

Riddha Manna, Ana Marija Jakšić, Ivan Tomić, Tomislav Stampar
preprint en

Abstract

Reliable behavioural measurement is critical to neuroscience discovery, but end-to-end automation of experiments using live animals is challenging. Preparation and transfer of live animals into and out of behavioural assays require skilled, dexterous, gentle and consistent handling. This is difficult to achieve without bespoke automation systems, which resist wide adoption. We present STELA, a robotic cell featuring off-the-shelf collaborative robot (cobot) that autonomously runs the complete workflow of a Drosophila behaviour experiment, from vial to data. Designed to emulate human routine fly laboratory procedures in human workspace, it performs manipulation of fly culture vials, CO2 fly anaesthesia, vision-guided sex classification, single live fly manipulation, and loading and disassembly of a behaviour assay, all in a programmed loop. In 24-h working day, STELA completed 16 experiments (1024 individual visual learning assays in flies) compared to the human who, in an 8-hour working day, completed 6 (384 assays). Retention of flies fit for analysis was similar (93.85% versus 83.33%, respectively), but with 12-fold improvement in handling consistency by the robot. In biologically matched behaviour experiments, robotic and manual handling resulted in the same mean fly behavioural outcomes, yet the robot significantly reduced inter-individual variability in baseline and learning behaviours. STELA demonstrates that it is possible to deploy standard robotic systems to flexibly automate one of the most challenging animal experiments. It provides a low-variance, high-throughput platform for scalable experimentation, and a path to closed-loop, democratized robotic acceleration of experimental discovery.

bioRxiv (Cold Spring Harbor Laboratory)
Robotics Research (United States) (US), École Polytechnique Fédérale de Lausanne (CH)
Neurobiology and Insect Physiology Research
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Laika access coming soon
End-to-end automation of behavioural experiments with a collaborative robot — Riddha Manna, Ana Marija Jakšić, et al. · bioRxiv (Cold Spring Harbor Laboratory) (2026) | TGRS Research Map | TGRS