Targeting SUFU-mediated GLI activity alleviates ciliopathic phenotypes

Ciliopathies are incurable, pleiotropic diseases that result from defective cilia. Several ciliopathic phenotypes arise from improper processing and activity of GLI transcription factors, yet attempts to rescue these phenotypes by overexpressing activator or repressor GLI isoforms have proven unsuccessful. Here, we demonstrate that modulating SUFU-GLI interactions restores GLI transcriptional activity and rescues ciliopathic phenotypes in vivo. As previous work identified increased accumulation of SUFU in ciliopathic conditions, we hypothesized that exploiting SUFU′s epistatic relationship to the cilium could provide a novel therapeutic strategy for ciliopathies. Genetic introduction of either a single null allele ( Sufu +/- ) or point mutation allele ( Sufu D159R ), which modulates SUFU-GLI binding, into a ciliopathic mouse model revealed that both interventions improved midfacial phenotypes; however, Sufu D159R provided a more complete rescue by significantly improving mandibular phenotypes as well. Molecular examination of this genetic modification revealed restored GLI3 binding to DNA, GLI3 interaction with transcriptional cofactors, and GLI3-directed transcription of target genes, collectively driving the rescue of numerous ciliopathic phenotypes. These findings reveal cilium-independent functions for SUFU and establish that modulating SUFU-GLI interactions bypasses the need for ciliary GLI processing. Together, these data provide a promising therapeutic approach for ameliorating ciliopathic pathologies.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-10-26
DOI
https://doi.org/10.64898/2026.10.23.760487
Primary Topic
Genetic and Kidney Cyst Diseases
Type
preprint

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preprint

Targeting SUFU-mediated GLI activity alleviates ciliopathic phenotypes

Timothy Nguyen, Daniel T. Rasicci, Samantha A. Brugmann, Kevin A. Peterson et al.
bioRxiv (Cold Spring Harbor Laboratory)
Genetic and Kidney Cyst Diseases
preprint

Targeting SUFU-mediated GLI activity alleviates ciliopathic phenotypes

Timothy Nguyen, Daniel T. Rasicci, Samantha A. Brugmann, Kevin A. Peterson, Ching‐Fang Chang, Kari M. Brown, Yanfen Yang
preprint en

Abstract

Ciliopathies are incurable, pleiotropic diseases that result from defective cilia. Several ciliopathic phenotypes arise from improper processing and activity of GLI transcription factors, yet attempts to rescue these phenotypes by overexpressing activator or repressor GLI isoforms have proven unsuccessful. Here, we demonstrate that modulating SUFU-GLI interactions restores GLI transcriptional activity and rescues ciliopathic phenotypes in vivo. As previous work identified increased accumulation of SUFU in ciliopathic conditions, we hypothesized that exploiting SUFU′s epistatic relationship to the cilium could provide a novel therapeutic strategy for ciliopathies. Genetic introduction of either a single null allele ( Sufu +/- ) or point mutation allele ( Sufu D159R ), which modulates SUFU-GLI binding, into a ciliopathic mouse model revealed that both interventions improved midfacial phenotypes; however, Sufu D159R provided a more complete rescue by significantly improving mandibular phenotypes as well. Molecular examination of this genetic modification revealed restored GLI3 binding to DNA, GLI3 interaction with transcriptional cofactors, and GLI3-directed transcription of target genes, collectively driving the rescue of numerous ciliopathic phenotypes. These findings reveal cilium-independent functions for SUFU and establish that modulating SUFU-GLI interactions bypasses the need for ciliary GLI processing. Together, these data provide a promising therapeutic approach for ameliorating ciliopathic pathologies.

bioRxiv (Cold Spring Harbor Laboratory)
Cincinnati Children's Hospital Medical Center (US), Jackson Laboratory (US)
National Institute of Dental and Craniofacial Research
Genetic and Kidney Cyst Diseases
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Targeting SUFU-mediated GLI activity alleviates ciliopathic phenotypes — Timothy Nguyen, Daniel T. Rasicci, et al. · bioRxiv (Cold Spring Harbor Laboratory) (2026) | TGRS Research Map | TGRS