Long-term surveillance of Enterobacter species and antimicrobial resistance in a secondary care centre in Oman: epidemiology and MDRO trends

Enterobacter species are important opportunistic pathogens with increasing multidrug resistance, but long-term regional surveillance integrating species distribution, antimicrobial resistance (AMR), and multidrug-resistant organism (MDRO) phenotypes remains limited. This study characterized nine years of laboratory surveillance in a secondary care centre in northern Oman. We retrospectively analyzed 1,805 non-duplicate isolates reported within the historical Enterobacter surveillance stream from 2017 to 2025. Species/taxon distribution, specimen source, antimicrobial susceptibility, department, acquisition source, and age-stratified MDRO burden were summarized. Resistance proportions used Wilson 95% confidence intervals; temporal trends used Spearman correlation; acquisition-source comparisons used chi-square tests; and age-associated MDRO prevalence used odds ratios and a Cochran-Armitage trend test. A weighted linear regression based on nine annual observations was retained only as an exploratory 2026 extrapolation for selected resistance rates and was not treated as a machine-learning model. Urine was the most common specimen (31.6%) and E. cloacae the most frequent identified taxon (47.0%); 21.3% remained at genus level. Overall MDRO prevalence was 27.6%. Third-generation cephalosporin resistance ranged from 37.7% (cefotaxime) to 67.2% (ceftazidime), while cefuroxime resistance was 93.7%. Tigecycline showed 98.1% susceptibility in a selectively tested subset ( n = 156), whereas colistin was 62.1% susceptible with 35.2% intermediate ( n = 182). Significant declining temporal trends were observed for meropenem, piperacillin-tazobactam, amikacin, and gentamicin. MDRO prevalence increased from 16.7% in patients aged 0–18 years to 45.2% in those > 80 years, but this association was unadjusted. The laboratory-recorded AmpC phenotype increased from 5 isolates in 2023 to 57 in 2025. The surveillance dataset demonstrates a substantial and changing AMR burden. Declining resistance to several agents was observed over time, but the retrospective design cannot attribute these changes to stewardship because antibiotic-consumption and intervention data were unavailable. The increase in the laboratory-recorded AmpC phenotype and the higher unadjusted MDRO prevalence in older patients warrant continued surveillance and confirmatory analyses. Integrated surveillance can support stewardship and infection-control planning when testing denominators, breakpoint changes, and phenotype-classification limitations are explicitly considered.

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Journal
Scientific Journal of King Faisal University Basic and Applied Sciences
Published
2026-10-26
DOI
https://doi.org/10.1007/s44523-026-00015-7
Primary Topic
Antibiotic Resistance in Bacteria
Type
article
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article

Long-term surveillance of Enterobacter species and antimicrobial resistance in a secondary care centre in Oman: epidemiology and MDRO trends

Salima Al-Maqbali, Vinod Nambiar, Mohan Bilikallahalli Sannathimmappa, Basavaraj Chandrashekar Metri et al.
Scientific Journal of King Faisal University Basic and Applied Sciences
Antibiotic Resistance in Bacteria
article

Long-term surveillance of Enterobacter species and antimicrobial resistance in a secondary care centre in Oman: epidemiology and MDRO trends

Salima Al-Maqbali, Vinod Nambiar, Mohan Bilikallahalli Sannathimmappa, Basavaraj Chandrashekar Metri, Jyothi Parameshwarapppa
article en

Abstract

Enterobacter species are important opportunistic pathogens with increasing multidrug resistance, but long-term regional surveillance integrating species distribution, antimicrobial resistance (AMR), and multidrug-resistant organism (MDRO) phenotypes remains limited. This study characterized nine years of laboratory surveillance in a secondary care centre in northern Oman. We retrospectively analyzed 1,805 non-duplicate isolates reported within the historical Enterobacter surveillance stream from 2017 to 2025. Species/taxon distribution, specimen source, antimicrobial susceptibility, department, acquisition source, and age-stratified MDRO burden were summarized. Resistance proportions used Wilson 95% confidence intervals; temporal trends used Spearman correlation; acquisition-source comparisons used chi-square tests; and age-associated MDRO prevalence used odds ratios and a Cochran-Armitage trend test. A weighted linear regression based on nine annual observations was retained only as an exploratory 2026 extrapolation for selected resistance rates and was not treated as a machine-learning model. Urine was the most common specimen (31.6%) and E. cloacae the most frequent identified taxon (47.0%); 21.3% remained at genus level. Overall MDRO prevalence was 27.6%. Third-generation cephalosporin resistance ranged from 37.7% (cefotaxime) to 67.2% (ceftazidime), while cefuroxime resistance was 93.7%. Tigecycline showed 98.1% susceptibility in a selectively tested subset ( n = 156), whereas colistin was 62.1% susceptible with 35.2% intermediate ( n = 182). Significant declining temporal trends were observed for meropenem, piperacillin-tazobactam, amikacin, and gentamicin. MDRO prevalence increased from 16.7% in patients aged 0–18 years to 45.2% in those > 80 years, but this association was unadjusted. The laboratory-recorded AmpC phenotype increased from 5 isolates in 2023 to 57 in 2025. The surveillance dataset demonstrates a substantial and changing AMR burden. Declining resistance to several agents was observed over time, but the retrospective design cannot attribute these changes to stewardship because antibiotic-consumption and intervention data were unavailable. The increase in the laboratory-recorded AmpC phenotype and the higher unadjusted MDRO prevalence in older patients warrant continued surveillance and confirmatory analyses. Integrated surveillance can support stewardship and infection-control planning when testing denominators, breakpoint changes, and phenotype-classification limitations are explicitly considered.

Scientific Journal of King Faisal University Basic and Applied SciencesVol. 27(2)
Shri BM Patil Medical College (IN), BLDE (Deemed to be University) (IN), National University of Science and Technology (OM)
Openalex Percentile: Top 22%
Antibiotic Resistance in Bacteria
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