Resolution preservation over architectural complexity: high-resolution patch-based semi-supervised learning for pancreas segmentation from CT images
Precise segmentation of the pancreas from computed tomography (CT) scans is critical for diagnosis and surgical planning but remains challenging due to the organ’s small volume (<0.5% of the abdomen), high anatomical variability, and low contrast with surrounding tissues. Conventional deep learning methods typically downsample inputs to fit GPU memory, destroying fine-grained boundary information essential for small-organ delineation. This study proposes a high-resolution patch-based framework that preserves native CT resolution (512 × 512) through 256 × 256 patch extraction with domain-specific Hounsfield unit (HU) windowing. A lightweight 2D U-Net (7.8M parameters) achieves 0.809±0.015 Dice (peak 0.849) on the Medical Segmentation Decathlon (MSD) Task07 Pancreas dataset, competitive with nnU-Net (0.823 Dice, 88M parameters) and far above SAM (0.705) and MedSAM (0.439). Five-fold cross-validation across all 281 volumes yields a population-level Dice of 0.630±0.025. Integrating uncertainty-aware mean teacher (UA-MT) semi-supervised learning recovers 99.3% of supervised performance using only 50% of labelled data, with reproducible results across three seeds (σ = 0.012). On 80 external TCIA volumes, UA-MT (0.603 Dice) outperforms the supervised model (0.544), demonstrating superior cross-domain generalisation.
Authors
- Kürşat Kömürcü (ORCID: https://orcid.org/0009-0006-1149-8686)
- Istiaque Ahmed
- Shinthiya Nowsain Promi (ORCID: https://orcid.org/0009-0001-1009-3605)
Institutions
- Vilnius Gediminas Technical University (LT)
- Vilnius University (LT)
- Czech Academy of Sciences, Institute of Computer Science (CZ)
Publication Details
- Journal
- New Trends in Computer Sciences
- Published
- 2026-10-26
- DOI
- https://doi.org/10.3846/ntcs.2026.26765
- Primary Topic
- Medical Image Segmentation Techniques
- Type
- article
- Field-Weighted Citation Impact
- 0.00