A Hybrid Mechanistic Model Capturing Lactate Run‐Away and Back‐Metabolism in Mammalian Cell Culture

ABSTRACT Mechanistic modeling is important in biopharmaceutical manufacturing by enabling in‐silico experimentation. However, developing a robust mechanistic model for mammalian cell culture remains challenging due to the complexity of the underlying bioprocesses. Existing data‐driven models often suffer from limited extrapolation capability and require extensive datasets. Not all modeling approaches can accurately represent differing metabolic scenarios such as lactate consumption and production. To address these limitations, this study proposes a hybrid mechanistic model for mammalian cell culture to improve predictive accuracy and process understanding. Our model integrates high‐frequency pH data with low‐frequency measurements of viable cell density (VCD), glucose, lactate, monoclonal antibody (mAb) concentrations from 10 runs (7 L). Novel kinetic equations for cell growth and death, and lactate metabolism considering both scenarios were developed. Additionally, our model enables automatic lactate switch detection based on time‐series pH and feeding data. It demonstrated high predictive capability with a mean R 2 of 0.88 for VCD, mAb, glucose, and lactate concentrations across training runs. Real‐time fine‐tuning further improved accuracy, reducing the root mean squared error (RMSE) for glucose by ~50% and for lactate by ~30%. The results indicate that our model provides accurate real‐time predictions of VCD, mAb, glucose, and lactate concentrations under variable bioprocessing conditions.

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Publication Details

Journal
Biotechnology and Bioengineering
Published
2026-10-22
DOI
https://doi.org/10.1002/bit.70417
Primary Topic
Viral Infectious Diseases and Gene Expression in Insects
Type
article
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article

A Hybrid Mechanistic Model Capturing Lactate Run‐Away and Back‐Metabolism in Mammalian Cell Culture

Suzanne S. Farid, James Savery, Stephen Goldrick, Li Qin et al.
Biotechnology and Bioengineering
Viral Infectious Diseases and Gene Expression in Insects
article

A Hybrid Mechanistic Model Capturing Lactate Run‐Away and Back‐Metabolism in Mammalian Cell Culture

Suzanne S. Farid, James Savery, Stephen Goldrick, Li Qin, Matthew Cheeks
article en

Abstract

ABSTRACT Mechanistic modeling is important in biopharmaceutical manufacturing by enabling in‐silico experimentation. However, developing a robust mechanistic model for mammalian cell culture remains challenging due to the complexity of the underlying bioprocesses. Existing data‐driven models often suffer from limited extrapolation capability and require extensive datasets. Not all modeling approaches can accurately represent differing metabolic scenarios such as lactate consumption and production. To address these limitations, this study proposes a hybrid mechanistic model for mammalian cell culture to improve predictive accuracy and process understanding. Our model integrates high‐frequency pH data with low‐frequency measurements of viable cell density (VCD), glucose, lactate, monoclonal antibody (mAb) concentrations from 10 runs (7 L). Novel kinetic equations for cell growth and death, and lactate metabolism considering both scenarios were developed. Additionally, our model enables automatic lactate switch detection based on time‐series pH and feeding data. It demonstrated high predictive capability with a mean R 2 of 0.88 for VCD, mAb, glucose, and lactate concentrations across training runs. Real‐time fine‐tuning further improved accuracy, reducing the root mean squared error (RMSE) for glucose by ~50% and for lactate by ~30%. The results indicate that our model provides accurate real‐time predictions of VCD, mAb, glucose, and lactate concentrations under variable bioprocessing conditions.

Biotechnology and Bioengineering
AstraZeneca (Australia) (AU), AstraZeneca (Poland) (PL), University College London (GB)
Openalex Percentile: Top 24%
Viral Infectious Diseases and Gene Expression in Insects
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A Hybrid Mechanistic Model Capturing Lactate Run‐Away and Back‐Metabolism in Mammalian Cell Culture — Suzanne S. Farid, James Savery, et al. · Biotechnology and Bioengineering (2026) | TGRS Research Map | TGRS