Cross-Dataset Generalization of Deep Learning for Retinal Vessel Segmentation in Fundus Images: External Evaluation from DRIVE to CHASE_DB1

Automated retinal vessel segmentation can support quantitative analysis of fundus photographs and facilitate measurement of vascular characteristics associated with ocular and systemic disease. Although deep-learning methods achieve high segmentation performance on benchmark datasets, their reliability may decrease when applied to images obtained under different acquisition conditions. This study evaluated the cross-dataset generalizability of a U-Net segmentation architecture incorporating an ImageNet-pretrained ResNet34 encoder. Sixteen images from the DRIVE dataset were used for model training and four were retained for in-domain validation. Images were resized to 256 × 256 pixels and processed using a consistent normalization pipeline, while spatial and photometric augmentation was applied during training. Without target-domain retraining or domain adaptation, the trained model was subsequently evaluated on the independent CHASE_DB1 dataset. Segmentation performance was assessed using the Dice coefficient, intersection over union (IoU), and sensitivity, together with qualitative examination of predicted vessel maps. On the held-out DRIVE images, the model achieved a Dice coefficient of 0.7263, IoU of 0.5703, and sensitivity of 0.7201. On CHASE_DB1, performance decreased to 0.6269, 0.4573, and 0.5502, respectively. The disproportionately larger reduction in sensitivity indicated an increased frequency of missed vessel pixels under cross-dataset evaluation. Qualitative examination showed greater fragmentation and omission of fine and peripheral vascular structures in CHASE_DB1 images. These findings demonstrate that within-dataset performance may overestimate the robustness of retinal vessel segmentation models when transferred to a different imaging domain. External evaluation should therefore form an important component of retinal imaging artificial intelligence research. Future work should investigate higher-resolution processing, vessel-width-specific evaluation, multi-domain training, domain-adaptation strategies, and larger multicentre datasets to improve model generalizability.

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Publication Details

Journal
Bioengineering
Published
2026-10-19
DOI
https://doi.org/10.3390/bioengineering13101215
Primary Topic
Retinal Imaging and Analysis
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article
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article

Cross-Dataset Generalization of Deep Learning for Retinal Vessel Segmentation in Fundus Images: External Evaluation from DRIVE to CHASE_DB1

Farhan Amin, Md Belal Bin Heyat, Mirtha Silvana Garat de Marín, Eduardo Silva Alvarado et al.
Bioengineering
Retinal Imaging and Analysis
article

Cross-Dataset Generalization of Deep Learning for Retinal Vessel Segmentation in Fundus Images: External Evaluation from DRIVE to CHASE_DB1

Farhan Amin, Md Belal Bin Heyat, Mirtha Silvana Garat de Marín, Eduardo Silva Alvarado, Rashid Abbasi, Isabel de la Torre, Madiha Jabeen Abbasi, Oyewale Ibrahim Abdulrasheed
article en

Abstract

Automated retinal vessel segmentation can support quantitative analysis of fundus photographs and facilitate measurement of vascular characteristics associated with ocular and systemic disease. Although deep-learning methods achieve high segmentation performance on benchmark datasets, their reliability may decrease when applied to images obtained under different acquisition conditions. This study evaluated the cross-dataset generalizability of a U-Net segmentation architecture incorporating an ImageNet-pretrained ResNet34 encoder. Sixteen images from the DRIVE dataset were used for model training and four were retained for in-domain validation. Images were resized to 256 × 256 pixels and processed using a consistent normalization pipeline, while spatial and photometric augmentation was applied during training. Without target-domain retraining or domain adaptation, the trained model was subsequently evaluated on the independent CHASE_DB1 dataset. Segmentation performance was assessed using the Dice coefficient, intersection over union (IoU), and sensitivity, together with qualitative examination of predicted vessel maps. On the held-out DRIVE images, the model achieved a Dice coefficient of 0.7263, IoU of 0.5703, and sensitivity of 0.7201. On CHASE_DB1, performance decreased to 0.6269, 0.4573, and 0.5502, respectively. The disproportionately larger reduction in sensitivity indicated an increased frequency of missed vessel pixels under cross-dataset evaluation. Qualitative examination showed greater fragmentation and omission of fine and peripheral vascular structures in CHASE_DB1 images. These findings demonstrate that within-dataset performance may overestimate the robustness of retinal vessel segmentation models when transferred to a different imaging domain. External evaluation should therefore form an important component of retinal imaging artificial intelligence research. Future work should investigate higher-resolution processing, vessel-width-specific evaluation, multi-domain training, domain-adaptation strategies, and larger multicentre datasets to improve model generalizability.

BioengineeringVol. 13(10)
Universidad de Valladolid (ES), Wenzhou University (CN), Wenzhou Medical University (CN), Westlake University (CN), Universidad Europea del Atlántico (ES), Universidad Internacional Iberoamericana, Yeungnam University (KR)
Openalex Percentile: Top 13%
Retinal Imaging and Analysis
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