A machine learning-optimized bivalent aptasensor based on exonuclease Ⅰ amplification for trace okadaic acid detection

Consumption of okadaic acid (OA)-contaminated seafood endangers human health, highlighting the need for sensitive quantitative detection. Herein, a convenient and highly sensitive bivalent aptasensor was developed for fluorescence detection of OA in aquatic products. The aptasensor was constructed using a bivalent aptamer (B-Apt) as the recognition element, DNA-silver nanoclusters (cDNA‑B‑Apt‑cDNA‑AgNCs) as the fluorescent probe, and Exonuclease Ⅰ (Exo Ⅰ)-assisted target recycling for signal amplification. To improve accuracy and reduce matrix interference, a machine learning (ML) approach was integrated for fluorescence spectral analysis. Principal component analysis (PCA) was applied for dimensionality reduction, followed by linear regression for concentration prediction, and the K-nearest neighbors (KNN) algorithm for classification. Under optimal conditions, the aptasensor achieved a limit of detection of 16.18 pM and a linear range of 500 pM-150 nM, with high specificity against other marine toxins and superior sensitivity over previously reported methods. Spike recovery tests in seafood samples (clam, prawn, squid, kelp, yellow catfish) yielded recoveries of 93.09–106.59 % and relative standard deviations below 9.06 %. The PCA-based model demonstrated excellent concentration prediction performance (R 2 = 0.9906), and the KNN model achieved 100% classification accuracy for OA at different concentrations. This bivalent aptasensor combined with interpretable ML offers a reliable and practical platform for hazardous OA monitoring in food safety applications.

Authors

Institutions

Publication Details

Journal
Sensors and Actuators B Chemical
Published
2026-10-16
DOI
https://doi.org/10.1016/j.snb.2026.141075
Primary Topic
Advanced biosensing and bioanalysis techniques
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A machine learning-optimized bivalent aptasensor based on exonuclease Ⅰ amplification for trace okadaic acid detection

Jinri Chen, 罗亚蒙, Xinxin Yan, Tengxin Yuan et al.
Sensors and Actuators B Chemical
Advanced biosensing and bioanalysis techniques
article

A machine learning-optimized bivalent aptasensor based on exonuclease Ⅰ amplification for trace okadaic acid detection

Jinri Chen, 罗亚蒙, Xinxin Yan, Tengxin Yuan, Wenyuan Fang, Weixia Wang, Jing Wang, Xiaofan Wang, Qiang Huang, Shaojie Wu, Junhuan Wang, Yachen Wang, Fuhou Li
article en

Abstract

Consumption of okadaic acid (OA)-contaminated seafood endangers human health, highlighting the need for sensitive quantitative detection. Herein, a convenient and highly sensitive bivalent aptasensor was developed for fluorescence detection of OA in aquatic products. The aptasensor was constructed using a bivalent aptamer (B-Apt) as the recognition element, DNA-silver nanoclusters (cDNA‑B‑Apt‑cDNA‑AgNCs) as the fluorescent probe, and Exonuclease Ⅰ (Exo Ⅰ)-assisted target recycling for signal amplification. To improve accuracy and reduce matrix interference, a machine learning (ML) approach was integrated for fluorescence spectral analysis. Principal component analysis (PCA) was applied for dimensionality reduction, followed by linear regression for concentration prediction, and the K-nearest neighbors (KNN) algorithm for classification. Under optimal conditions, the aptasensor achieved a limit of detection of 16.18 pM and a linear range of 500 pM-150 nM, with high specificity against other marine toxins and superior sensitivity over previously reported methods. Spike recovery tests in seafood samples (clam, prawn, squid, kelp, yellow catfish) yielded recoveries of 93.09–106.59 % and relative standard deviations below 9.06 %. The PCA-based model demonstrated excellent concentration prediction performance (R 2 = 0.9906), and the KNN model achieved 100% classification accuracy for OA at different concentrations. This bivalent aptasensor combined with interpretable ML offers a reliable and practical platform for hazardous OA monitoring in food safety applications.

Sensors and Actuators B ChemicalVol. 471
Fudan University (CN), State Key Laboratory of Genetic Engineering, Ocean University of China (CN)
China Postdoctoral Science Foundation
Openalex Percentile: Top 23%
Advanced biosensing and bioanalysis techniques
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.