Polyglycine Strands Within a Collagen Triple Helix

ABSTRACT The collagen triple helix is the most abundant protein structural motif in animals. It tolerates any amino acid in its Xaa and Yaa positions but demands glycine (Gly) at every third position, where the residue packs into the sterically forbidding core of the triple helix and donates the recurring interstrand N–H⋯OC hydrogen bond that stitches the three strands together. (2 S )‐Proline (Pro) and (2 S ,4 R )‐4‐hydroxyproline (Hyp) are enriched far above their proteome‐wide abundance because they preorganize individual strands into the polyproline II conformation, lowering the entropic cost of folding. We asked whether the triple helix is intrinsically stable enough to form from strands that carry no such preorganization, that is, from polyglycine. To offset the conformational entropy of a Gly‐rich tract, we embedded Gly 6 within flanking triple‐helical (Pro‐Hyp‐Gly) n clamps in Ac‐(Pro‐Hyp‐Gly) 6 ‐Gly 6 ‐(Pro‐Hyp‐Gly) 5 ‐Pro‐Hyp‐NH 2 and compared it with an otherwise identical peptide in which Gly 6 was replaced by two [2‐(2‐aminoethoxy)ethoxy]acetic acid units, a flexible, length‐matched spacer that lacks most of the regularly spaced backbone amides of Gly 6 . Circular dichroism spectroscopy revealed the diagnostic positive band at 225 nm. The molar ellipticity of the spacer‐containing control was 86% of that of the Gly 6 ‐containing peptide, matching the 35/41 = 85% ratio of residues capable of triple‐helix formation and consistent with the Gly 6 segment contributing to the triple‐helical signal. Thermal denaturation yielded a T m of 46.8°C for the Gly 6 ‐containing peptide, 6.3°C higher than that of the matched spacer control. This added stability indicates that the polyglycine tract is not merely accommodated within the helix but contributes stabilizing interstrand hydrogen bonds. Together, these data indicate that three polyglycine strands can form a collagen triple helix when flanked by triple‐helical clamps. This result is consistent with the idea that the triple‐helical architecture predates the recruitment of Pro and Hyp, informs the evolutionary origin of collagen, and offers a blunt‐ended, symmetric scaffold for designing peptidic triple helices.

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Publication Details

Journal
Biopolymers
Published
2026-10-16
DOI
https://doi.org/10.1002/bip.70127
Primary Topic
Collagen: Extraction and Characterization
Type
article
Field-Weighted Citation Impact
0.00

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article

Polyglycine Strands Within a Collagen Triple Helix

Gabriel Saenz, Ronald T. Raines, Jinyi Yang, Wasin Tiarawut
Biopolymers
Collagen: Extraction and Characterization
article

Polyglycine Strands Within a Collagen Triple Helix

Gabriel Saenz, Ronald T. Raines, Jinyi Yang, Wasin Tiarawut
article en

Abstract

ABSTRACT The collagen triple helix is the most abundant protein structural motif in animals. It tolerates any amino acid in its Xaa and Yaa positions but demands glycine (Gly) at every third position, where the residue packs into the sterically forbidding core of the triple helix and donates the recurring interstrand N–H⋯OC hydrogen bond that stitches the three strands together. (2 S )‐Proline (Pro) and (2 S ,4 R )‐4‐hydroxyproline (Hyp) are enriched far above their proteome‐wide abundance because they preorganize individual strands into the polyproline II conformation, lowering the entropic cost of folding. We asked whether the triple helix is intrinsically stable enough to form from strands that carry no such preorganization, that is, from polyglycine. To offset the conformational entropy of a Gly‐rich tract, we embedded Gly 6 within flanking triple‐helical (Pro‐Hyp‐Gly) n clamps in Ac‐(Pro‐Hyp‐Gly) 6 ‐Gly 6 ‐(Pro‐Hyp‐Gly) 5 ‐Pro‐Hyp‐NH 2 and compared it with an otherwise identical peptide in which Gly 6 was replaced by two [2‐(2‐aminoethoxy)ethoxy]acetic acid units, a flexible, length‐matched spacer that lacks most of the regularly spaced backbone amides of Gly 6 . Circular dichroism spectroscopy revealed the diagnostic positive band at 225 nm. The molar ellipticity of the spacer‐containing control was 86% of that of the Gly 6 ‐containing peptide, matching the 35/41 = 85% ratio of residues capable of triple‐helix formation and consistent with the Gly 6 segment contributing to the triple‐helical signal. Thermal denaturation yielded a T m of 46.8°C for the Gly 6 ‐containing peptide, 6.3°C higher than that of the matched spacer control. This added stability indicates that the polyglycine tract is not merely accommodated within the helix but contributes stabilizing interstrand hydrogen bonds. Together, these data indicate that three polyglycine strands can form a collagen triple helix when flanked by triple‐helical clamps. This result is consistent with the idea that the triple‐helical architecture predates the recruitment of Pro and Hyp, informs the evolutionary origin of collagen, and offers a blunt‐ended, symmetric scaffold for designing peptidic triple helices.

BiopolymersVol. 117(6)
Massachusetts Institute of Technology (US)
National Science Foundation, Massachusetts Institute of Technology, National Institutes of Health
Openalex Percentile: Top 29%
Collagen: Extraction and Characterization
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