Complete Genome Sequence of Halorubrum Pleomorphic Virus 8

Pleomorphic archaeal viruses are widespread and abundant in hypersaline environments and beyond. Still, a relatively low number of isolated and described species are available for this viral group. Here, we present the complete genome sequence of Halorubrum pleomorphic virus 8 (HRPV-8), which was previously isolated from the Samut Sakhon solar saltern, Thailand, on a Halorubrum species. The HRPV-8 genome was assembled into a circular 10,824-bp-long contig with a GC content of 63.2%. The genome was predicted to encode 12 proteins, including a VP4-like spike protein, which is a hallmark of pleomorphic archaeal viruses. In HRPV-8, seven and three putative proteins were 99–100% identical to their counterparts in Halorubrum pleomorphic viruses 2 and 6, respectively, which are members of the genus Alphapleolipovirus. The average nucleotide identity values within these three viral genomes were 92–96%. According to VIRIDIC analyses of intergenomic similarities, HRPV-8 represents its own species. Thus, based on the observed pleolipoviral genome architecture and sequence similarities to other alphapleolipoviruses, we propose to classify HRPV-8 as a new species within the Alphapleolipovirus genus of the Pleolipoviridae family.

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Publication Details

Journal
F1000Research
Published
2026-10-15
DOI
https://doi.org/10.12688/f1000research.179903.3
Primary Topic
Bacteriophages and microbial interactions
Type
article
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article

Complete Genome Sequence of Halorubrum Pleomorphic Virus 8

Tatiana A. Demina, Hanna M. Oksanen, Elina Laanto
F1000Research
Bacteriophages and microbial interactions
article

Complete Genome Sequence of Halorubrum Pleomorphic Virus 8

Tatiana A. Demina, Hanna M. Oksanen, Elina Laanto
article en

Abstract

Pleomorphic archaeal viruses are widespread and abundant in hypersaline environments and beyond. Still, a relatively low number of isolated and described species are available for this viral group. Here, we present the complete genome sequence of Halorubrum pleomorphic virus 8 (HRPV-8), which was previously isolated from the Samut Sakhon solar saltern, Thailand, on a Halorubrum species. The HRPV-8 genome was assembled into a circular 10,824-bp-long contig with a GC content of 63.2%. The genome was predicted to encode 12 proteins, including a VP4-like spike protein, which is a hallmark of pleomorphic archaeal viruses. In HRPV-8, seven and three putative proteins were 99–100% identical to their counterparts in Halorubrum pleomorphic viruses 2 and 6, respectively, which are members of the genus Alphapleolipovirus. The average nucleotide identity values within these three viral genomes were 92–96%. According to VIRIDIC analyses of intergenomic similarities, HRPV-8 represents its own species. Thus, based on the observed pleolipoviral genome architecture and sequence similarities to other alphapleolipoviruses, we propose to classify HRPV-8 as a new species within the Alphapleolipovirus genus of the Pleolipoviridae family.

F1000ResearchVol. 15
University of Helsinki (FI), University of Jyväskylä (FI)
Openalex Percentile: Top 16%
Bacteriophages and microbial interactions
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