The genome sequence of grey willow, Salix cinerea L. (Malpighiales: Salicaceae)
We present a genome assembly of the tetraploid Salix cinerea (2 n = 4 x = 76; grey willow; Streptophyta; Magnoliopsida; Malpighiales; Salicaceae). The submitted sequence comprises two assemblies designated haplotype 1 and haplotype 2, with total lengths of 386.72 megabases and 1,004.23 megabases, respectively. Haplotype 1 represents a single monoploid chromosome complement; 87.7% was scaffolded into 19 chromosomal pseudomolecules, including the Z sex chromosome. Haplotype 2 was assembled to scaffold level. The mitochondrial genome assembly has a length of 686.79 kilobases and the plastid genome assembly has a length of 155.63 kilobases. Gene annotation of the haplotype 1 assembly by Ensembl identified 34,898 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.
Authors
- Markus Ruhsam (ORCID: https://orcid.org/0000-0002-8457-345X)
- Peter M. Hollingsworth (ORCID: https://orcid.org/0000-0003-0602-0654)
- Darwin Tree of Life Barcoding Collective
- Plant Genome Sizing collective
- Royal Botanic Garden Edinburgh Genome Acquisition Lab
- Tree of Life Core Informatics collective
Institutions
- Royal Botanic Garden Edinburgh (GB)
Publication Details
- Journal
- Wellcome Open Research
- Published
- 2026-10-15
- DOI
- https://doi.org/10.12688/wellcomeopenres.27945.1
- Primary Topic
- Chromosomal and Genetic Variations
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Wellcome Trust