Engineering Intramolecular Hydrogen Bond Networks to Access Ensembles of Conformational Isomers of 24-Atom Macrocycles: Computation Corroborates Assignments and Predicts Structure

Abstract Intramolecular hydrogen bond (IMHB) networks contribute to the shape and physical properties of macrocycles. Understanding and ultimately engineering these networks represents a challenge to the field, both experimentally and computationally. Here, 24-atom triazine macrocycles are used as a model system to probe how a competing IMHB network can influence ensemble populations. Substitution distant from the macrocycle backbone offers an opportunity for introducing a competitive hydrogen bond donor. In its absence, incorporating symmetric and unsymmetric 2° amines leads to one and three persistent conformational isomers, respectively. Incorporation of a 1° amine leads to a competing IMHB network. Five persistent conformational isomers are observed. Computation corroborates assignment of the known conformers and predicts the structure of the emergent isomer: An expanded hinge conformer joins the hinge and non-hinge shapes previously reported. Corroborating evidence comes from H/D exchange of a methylene group on the macrocycle backbone, allowing for interpretation of a critical region of the 1H NMR spectrum. This five-conformer ensemble appears to be independent of the 1° amine chosen based on evidence obtained from 13C NMR spectra.

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Publication Details

Journal
The Journal of Organic Chemistry
Published
2026-10-15
DOI
https://doi.org/10.1021/acs.joc.6c01634
Primary Topic
Supramolecular Chemistry and Complexes
Type
article
Field-Weighted Citation Impact
0.00

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article

Engineering Intramolecular Hydrogen Bond Networks to Access Ensembles of Conformational Isomers of 24-Atom Macrocycles: Computation Corroborates Assignments and Predicts Structure

K. Harsha Vardhan Reddy, Liam E. Claton, Eric E. Simanek
The Journal of Organic Chemistry
Supramolecular Chemistry and Complexes
article

Engineering Intramolecular Hydrogen Bond Networks to Access Ensembles of Conformational Isomers of 24-Atom Macrocycles: Computation Corroborates Assignments and Predicts Structure

K. Harsha Vardhan Reddy, Liam E. Claton, Eric E. Simanek
article en

Abstract

Abstract Intramolecular hydrogen bond (IMHB) networks contribute to the shape and physical properties of macrocycles. Understanding and ultimately engineering these networks represents a challenge to the field, both experimentally and computationally. Here, 24-atom triazine macrocycles are used as a model system to probe how a competing IMHB network can influence ensemble populations. Substitution distant from the macrocycle backbone offers an opportunity for introducing a competitive hydrogen bond donor. In its absence, incorporating symmetric and unsymmetric 2° amines leads to one and three persistent conformational isomers, respectively. Incorporation of a 1° amine leads to a competing IMHB network. Five persistent conformational isomers are observed. Computation corroborates assignment of the known conformers and predicts the structure of the emergent isomer: An expanded hinge conformer joins the hinge and non-hinge shapes previously reported. Corroborating evidence comes from H/D exchange of a methylene group on the macrocycle backbone, allowing for interpretation of a critical region of the 1H NMR spectrum. This five-conformer ensemble appears to be independent of the 1° amine chosen based on evidence obtained from 13C NMR spectra.

The Journal of Organic Chemistry
Texas Christian University (US)
National Science Foundation, Welch Foundation, National Institute of General Medical Sciences
Openalex Percentile: Top 26%
Supramolecular Chemistry and Complexes
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