COMPLAX: A Python Tool Package for Automated Microsolvation of Organic Molecules

Abstract Since the solvent choice drives organic reactivity, accurate computational modeling of explicit solute–solvent interactions remains crucial but preparation-intensive. We present COMPLAX, an open-source Python tool that automates the generation and optimization of targeted microsolvated clusters around highly localized active sites. Unlike unconstrained global optimizers, COMPLAX employs a rigid-core approach to preserve delicate solute geometries. To ensure unbiased spatial sampling, it couples a deterministic Fibonacci spherical lattice with three-dimensional rotational randomizations. Generated structures are refined via a two-stage xTB geometry optimization, utilizing a constrained pre-relaxation step to prevent unphysical solvent detachment. By automating conformer ranking and energy evaluations via a simple command-line interface, COMPLAX provides a reproducible, out-of-the-box solution for explicit microsolvation workflows.

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Publication Details

Journal
Journal of Chemical Information and Modeling
Published
2026-10-09
DOI
https://doi.org/10.1021/acs.jcim.6c02105
Primary Topic
Advanced Chemical Physics Studies
Type
article
Field-Weighted Citation Impact
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article

COMPLAX: A Python Tool Package for Automated Microsolvation of Organic Molecules

Federica Lauria, Andrea Maranzana
Journal of Chemical Information and Modeling
Advanced Chemical Physics Studies
article

COMPLAX: A Python Tool Package for Automated Microsolvation of Organic Molecules

Federica Lauria, Andrea Maranzana
article en

Abstract

Abstract Since the solvent choice drives organic reactivity, accurate computational modeling of explicit solute–solvent interactions remains crucial but preparation-intensive. We present COMPLAX, an open-source Python tool that automates the generation and optimization of targeted microsolvated clusters around highly localized active sites. Unlike unconstrained global optimizers, COMPLAX employs a rigid-core approach to preserve delicate solute geometries. To ensure unbiased spatial sampling, it couples a deterministic Fibonacci spherical lattice with three-dimensional rotational randomizations. Generated structures are refined via a two-stage xTB geometry optimization, utilizing a constrained pre-relaxation step to prevent unphysical solvent detachment. By automating conformer ranking and energy evaluations via a simple command-line interface, COMPLAX provides a reproducible, out-of-the-box solution for explicit microsolvation workflows.

Journal of Chemical Information and Modeling
University of Turin (IT)
Openalex Percentile: Top 19%
Advanced Chemical Physics Studies
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COMPLAX: A Python Tool Package for Automated Microsolvation of Organic Molecules — Federica Lauria, Andrea Maranzana · Journal of Chemical Information and Modeling (2026) | TGRS Research Map | TGRS