Reliability-aware dual-representation DCE-MRI segmentation with disagreement-guided quality control for breast tumor delineation

Automated breast tumor segmentation on dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) may support quantitative imaging analysis, but case-level segmentation failures remain a concern in heterogeneous multicenter data. We evaluated a reliability-aware dual-representation framework using the MAMA-MIA dataset. Five-fold out-of-fold (OOF) predictions from the 1,200-case development cohort were used exclusively to calibrate low-confidence burden (LCB)-based quality-control (QC) rules, which were then applied unchanged to final predictions from a separate 306-case held-out cohort. Raw3P used the pre-contrast and two post-contrast phases, whereas Sub513 used the pre-contrast phase and two subtraction maps. Separate nnU-Net v2 models were trained, and the binary-intersection ensemble was evaluated as a conservative consensus segmentation strategy. The resulting binary-intersection mask achieved mean Dice 0.763, precision 0.786, recall 0.814, 95th-percentile Hausdorff distance 40.16 mm, average symmetric surface distance 11.70 mm, normalized surface Dice at 2 mm 0.769, and absolute relative volume error 74.9%. Compared with the probability-averaging ensemble, the mean Dice gain was modest (0.0044; paired bootstrap 95% CI, 0.0013 to 0.0075), while recall decreased by 0.0166. At the frozen 40%-OOF-targeted point, 159/306 cases (52.0%) were referred for review, including 33/35 poor-quality masks (94.3%); the two missed poor-quality masks were false-negative QC cases among the 147 cases not referred. Dual-representation outputs therefore provided a useful case-level QC signal, but not a fail-safe or fully autonomous segmentation system.

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Publication Details

Journal
Biomedical Signal Processing and Control
Published
2026-10-09
DOI
https://doi.org/10.1016/j.bspc.2026.111588
Primary Topic
Medical Image Segmentation Techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

Reliability-aware dual-representation DCE-MRI segmentation with disagreement-guided quality control for breast tumor delineation

Chih Mao Tsai, Jiann-Der Lee
Biomedical Signal Processing and Control
Medical Image Segmentation Techniques
article

Reliability-aware dual-representation DCE-MRI segmentation with disagreement-guided quality control for breast tumor delineation

Chih Mao Tsai, Jiann-Der Lee
article en

Abstract

Automated breast tumor segmentation on dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) may support quantitative imaging analysis, but case-level segmentation failures remain a concern in heterogeneous multicenter data. We evaluated a reliability-aware dual-representation framework using the MAMA-MIA dataset. Five-fold out-of-fold (OOF) predictions from the 1,200-case development cohort were used exclusively to calibrate low-confidence burden (LCB)-based quality-control (QC) rules, which were then applied unchanged to final predictions from a separate 306-case held-out cohort. Raw3P used the pre-contrast and two post-contrast phases, whereas Sub513 used the pre-contrast phase and two subtraction maps. Separate nnU-Net v2 models were trained, and the binary-intersection ensemble was evaluated as a conservative consensus segmentation strategy. The resulting binary-intersection mask achieved mean Dice 0.763, precision 0.786, recall 0.814, 95th-percentile Hausdorff distance 40.16 mm, average symmetric surface distance 11.70 mm, normalized surface Dice at 2 mm 0.769, and absolute relative volume error 74.9%. Compared with the probability-averaging ensemble, the mean Dice gain was modest (0.0044; paired bootstrap 95% CI, 0.0013 to 0.0075), while recall decreased by 0.0166. At the frozen 40%-OOF-targeted point, 159/306 cases (52.0%) were referred for review, including 33/35 poor-quality masks (94.3%); the two missed poor-quality masks were false-negative QC cases among the 147 cases not referred. Dual-representation outputs therefore provided a useful case-level QC signal, but not a fail-safe or fully autonomous segmentation system.

Biomedical Signal Processing and ControlVol. 130
Ming Chi University of Technology (TW), Chang Gung University (TW), Chang Gung Memorial Hospital (TW), Linkou Chang Gung Memorial Hospital (TW)
National Science and Technology Council
Good health and well-being
Openalex Percentile: Top 16%
Medical Image Segmentation Techniques
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