Spathology: The Birth of Spatial Pathology as a Discipline

Pathology has always been a spatial science: for more than 150 years, diagnosis has rested on reading the architecture of cells and tissues. Three technological streams are now converging on this founding principle. Spatially resolved omics can measure thousands of transcripts and over a hundred proteins in intact, formalin-fixed paraffin-embedded (FFPE) tissue; multiplexed imaging quantifies tissue microenvironments cell by cell; and computational pathology has progressed from slide digitization to foundation models that can predict molecular features from morphology. The clinical evidence for spatial readouts is real but heterogeneous: a few assays have reached guideline mention or prospective use, while most findings remain retrospective, platform-dependent, and unevenly validated. Yet the field remains fragmented across “spatial biology”, “digital pathology”, and “computational pathology”, without a unified framework for standards, training, and diagnostics. Here we propose, for discussion rather than as a settled matter, that this convergence be treated as a coherent branch of pathology, “spatial pathology”, which we define as the use of spatially resolved measurements of tissue to derive diagnostic, prognostic, and predictive information. We set out which problems existing structures do not yet address, acknowledge the counterarguments, and outline a consensus-building agenda. We also suggest “spathology” as an optional shorthand, and we disclose openly that all authors are co-founders of a company, SPATHO AB, whose name derives from the same contraction.

Authors

Institutions

Publication Details

Journal
Life
Published
2026-10-08
DOI
https://doi.org/10.3390/life16101680
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Spathology: The Birth of Spatial Pathology as a Discipline

Taobo Hu, Mengping Long, Mats Nilsson
Life
Single-cell and spatial transcriptomics
article

Spathology: The Birth of Spatial Pathology as a Discipline

Taobo Hu, Mengping Long, Mats Nilsson
article en

Abstract

Pathology has always been a spatial science: for more than 150 years, diagnosis has rested on reading the architecture of cells and tissues. Three technological streams are now converging on this founding principle. Spatially resolved omics can measure thousands of transcripts and over a hundred proteins in intact, formalin-fixed paraffin-embedded (FFPE) tissue; multiplexed imaging quantifies tissue microenvironments cell by cell; and computational pathology has progressed from slide digitization to foundation models that can predict molecular features from morphology. The clinical evidence for spatial readouts is real but heterogeneous: a few assays have reached guideline mention or prospective use, while most findings remain retrospective, platform-dependent, and unevenly validated. Yet the field remains fragmented across “spatial biology”, “digital pathology”, and “computational pathology”, without a unified framework for standards, training, and diagnostics. Here we propose, for discussion rather than as a settled matter, that this convergence be treated as a coherent branch of pathology, “spatial pathology”, which we define as the use of spatially resolved measurements of tissue to derive diagnostic, prognostic, and predictive information. We set out which problems existing structures do not yet address, acknowledge the counterarguments, and outline a consensus-building agenda. We also suggest “spathology” as an optional shorthand, and we disclose openly that all authors are co-founders of a company, SPATHO AB, whose name derives from the same contraction.

LifeVol. 16(10)
Stockholm University (SE), Science for Life Laboratory (SE)
Openalex Percentile: Top 23%
Single-cell and spatial transcriptomics
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Spathology: The Birth of Spatial Pathology as a Discipline — Taobo Hu, Mengping Long, et al. · Life (2026) | TGRS Research Map | TGRS