PROSAIL-DNN-TL: A Hyperspectral Inversion Framework for Winter Wheat Leaf Chlorophyll Content Based on Fine-Tuned Transfer Learning

Accurate and efficient estimation of leaf chlorophyll content (LCC) is essential for crop physiological monitoring and precision agriculture. Current remote sensing approaches for LCC estimation mainly rely on machine learning and deep learning methods, which exhibit strong nonlinear modelling capabilities but require sufficient and representative samples. Radiative transfer models (RTMs) can simulate canopy spectral response based on physical mechanisms and generate large-scale datasets, thereby overcoming the limitations of purely data-driven approaches. However, their applications under diverse environmental conditions remain challenging due to uncertainties caused by model parameterization and discrepancies between simulated and observed data. This study proposed a hybrid framework, PROSAIL-DNN-TL, integrating the PROSAIL RTM with full-network fine-tuned transfer learning for winter wheat LCC estimation. First, 85,680 simulated samples generated by PROSAIL were used to pre-train a deep neural network (DNN), and field observations (n = 270) were subsequently used for full-network fine-tuning. A conventional DNN model trained only with field data and machine learning models based on different feature selection strategies were established for comparison. The results showed that: (1) UVE-selected bands were distributed across visible, red-edge, and near-infrared regions; CARS retained more bands in the visible region, whereas SPA mainly selected near-infrared bands; (2) RR and SVR achieved higher accuracy than KNN, with the full-spectrum and CARS feature sets showing superior performance and SPA showing the lowest accuracy; (3) PROSAIL-DNN-TL achieved reliable LCC estimation performance, with an average test R2 of 0.79 across 500 repeated experiments, and showed improved performance compared with conventional machine learning models; (4) PROSAIL-DNN-TL achieved reliable predictive performance when evaluated using datasets collected during the 2024 and 2025 growing seasons, with R2 values of 0.75 and 0.92, respectively. Overall, the proposed hybrid framework integrates physical knowledge from RTMs with data-driven modelling through transfer learning, providing a potential approach for crop chlorophyll monitoring. However, the SPAD-to-LCC conversion used in this study was not specifically calibrated for the instrument and crop, and therefore, the absolute LCC values should be interpreted with caution.

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Publication Details

Journal
Agronomy
Published
2026-10-07
DOI
https://doi.org/10.3390/agronomy16191971
Primary Topic
Remote Sensing in Agriculture
Type
article
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article

PROSAIL-DNN-TL: A Hyperspectral Inversion Framework for Winter Wheat Leaf Chlorophyll Content Based on Fine-Tuned Transfer Learning

Jikai Liu, Ying Nian, Xueqing Zhu, Xinwei Li
Agronomy
Remote Sensing in Agriculture
article

PROSAIL-DNN-TL: A Hyperspectral Inversion Framework for Winter Wheat Leaf Chlorophyll Content Based on Fine-Tuned Transfer Learning

Jikai Liu, Ying Nian, Xueqing Zhu, Xinwei Li
article en

Abstract

Accurate and efficient estimation of leaf chlorophyll content (LCC) is essential for crop physiological monitoring and precision agriculture. Current remote sensing approaches for LCC estimation mainly rely on machine learning and deep learning methods, which exhibit strong nonlinear modelling capabilities but require sufficient and representative samples. Radiative transfer models (RTMs) can simulate canopy spectral response based on physical mechanisms and generate large-scale datasets, thereby overcoming the limitations of purely data-driven approaches. However, their applications under diverse environmental conditions remain challenging due to uncertainties caused by model parameterization and discrepancies between simulated and observed data. This study proposed a hybrid framework, PROSAIL-DNN-TL, integrating the PROSAIL RTM with full-network fine-tuned transfer learning for winter wheat LCC estimation. First, 85,680 simulated samples generated by PROSAIL were used to pre-train a deep neural network (DNN), and field observations (n = 270) were subsequently used for full-network fine-tuning. A conventional DNN model trained only with field data and machine learning models based on different feature selection strategies were established for comparison. The results showed that: (1) UVE-selected bands were distributed across visible, red-edge, and near-infrared regions; CARS retained more bands in the visible region, whereas SPA mainly selected near-infrared bands; (2) RR and SVR achieved higher accuracy than KNN, with the full-spectrum and CARS feature sets showing superior performance and SPA showing the lowest accuracy; (3) PROSAIL-DNN-TL achieved reliable LCC estimation performance, with an average test R2 of 0.79 across 500 repeated experiments, and showed improved performance compared with conventional machine learning models; (4) PROSAIL-DNN-TL achieved reliable predictive performance when evaluated using datasets collected during the 2024 and 2025 growing seasons, with R2 values of 0.75 and 0.92, respectively. Overall, the proposed hybrid framework integrates physical knowledge from RTMs with data-driven modelling through transfer learning, providing a potential approach for crop chlorophyll monitoring. However, the SPAD-to-LCC conversion used in this study was not specifically calibrated for the instrument and crop, and therefore, the absolute LCC values should be interpreted with caution.

AgronomyVol. 16(19)
Anhui Science and Technology University (CN)
Openalex Percentile: Top 15%
Remote Sensing in Agriculture
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