Evaluation of boundary-aware UNet++ for low-grade glioma segmentation

Automated brain tumour segmentation remains challenging because of diffuse boundaries, class imbalance, and variation in lesion appearance. We evaluated a boundary-aware low-grade glioma segmentation framework using UNet++ with an ImageNet-pretrained EfficientNet-B4 encoder and a composite objective including an SDF-guided confidence regulariser. Evaluation used a held-out 22-patient internal test cohort, controlled component and architecture ablations, a three-seed SDF comparison, and zero-shot testing on three external BraTS cohorts. Internally, mean tumour-positive slice DSC was 0.8320, whole-cohort DSC was 0.9086, and mean patient-level DSC was 0.8731; mean slice HD95 was 7.66 pixels. The SDF regulariser showed favourable average multi-seed effects. Under the primary replicated-FLAIR external protocol, mean patient-level DSC was 0.6194 for TCGA-LGG, 0.6007 for full BraTS 2021, and 0.3862 for BraTS-Africa. These findings support encouraging internal performance but limited cross-dataset robustness.

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Publication Details

Journal
Scientific Reports
Published
2026-10-07
DOI
https://doi.org/10.1038/s41598-026-71836-0
Primary Topic
Brain Tumor Detection and Classification
Type
article
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article

Evaluation of boundary-aware UNet++ for low-grade glioma segmentation

Amit Kumar Sharma, Hiya Ajay Gupta
Scientific Reports
Brain Tumor Detection and Classification
article

Evaluation of boundary-aware UNet++ for low-grade glioma segmentation

Amit Kumar Sharma, Hiya Ajay Gupta
article en

Abstract

Automated brain tumour segmentation remains challenging because of diffuse boundaries, class imbalance, and variation in lesion appearance. We evaluated a boundary-aware low-grade glioma segmentation framework using UNet++ with an ImageNet-pretrained EfficientNet-B4 encoder and a composite objective including an SDF-guided confidence regulariser. Evaluation used a held-out 22-patient internal test cohort, controlled component and architecture ablations, a three-seed SDF comparison, and zero-shot testing on three external BraTS cohorts. Internally, mean tumour-positive slice DSC was 0.8320, whole-cohort DSC was 0.9086, and mean patient-level DSC was 0.8731; mean slice HD95 was 7.66 pixels. The SDF regulariser showed favourable average multi-seed effects. Under the primary replicated-FLAIR external protocol, mean patient-level DSC was 0.6194 for TCGA-LGG, 0.6007 for full BraTS 2021, and 0.3862 for BraTS-Africa. These findings support encouraging internal performance but limited cross-dataset robustness.

Scientific Reports
Manipal University Jaipur
Openalex Percentile: Top 18%
Brain Tumor Detection and Classification
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Evaluation of boundary-aware UNet++ for low-grade glioma segmentation — Amit Kumar Sharma, Hiya Ajay Gupta · Scientific Reports (2026) | TGRS Research Map | TGRS