Structural dynamics and pH ‐regulated membrane binding of the TRAF2 ‐ NC trimer

Tumor necrosis factor receptor-associated factor 2 (TRAF2) is a key adaptor in TNF receptor-signaling that operates as a trimeric assembly. Here we investigate the structural and functional properties of a TRAF2 construct spanning the trimerization and receptor-binding domains (TRAF2-NC, residues 266-501). According to SAXS data, under physiological conditions, TRAF2-NC preserves a stable trimeric structure with signs of conformational flexibility. Conversely, in a mildly acidic environment (pH 5.7), the protein adopts a less compact and more heterogeneous conformation. In this condition, fluorescence energy transfer measurements reveal an increased membrane-binding propensity in the presence of ganglioside GM1. Together, these results indicate that TRAF2 oligomerization is modulated by pH-dependent conformational changes, suggesting that increased structural flexibility and partial exposure of hydrophobic regions facilitate membrane association under stress conditions, and providing a mechanistic link between structural dynamics and TRAF2 function.

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Publication Details

Journal
Protein Science
Published
2026-10-06
DOI
https://doi.org/10.1002/pro.70817
Primary Topic
Protein Structure and Dynamics
Type
article
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article

Structural dynamics and pH ‐regulated membrane binding of the TRAF2 ‐ NC trimer

Giampiero Mei, Francesco Bonì, Almerinda Di Venere, Eloise Mastrangelo et al.
Protein Science
Protein Structure and Dynamics
article

Structural dynamics and pH ‐regulated membrane binding of the TRAF2 ‐ NC trimer

Giampiero Mei, Francesco Bonì, Almerinda Di Venere, Eloise Mastrangelo, Federica Cossu, Toni Giorgino, Mario Milani, Federico Ballabio, Bianca Braggiotti, Serena Virili
article en

Abstract

Tumor necrosis factor receptor-associated factor 2 (TRAF2) is a key adaptor in TNF receptor-signaling that operates as a trimeric assembly. Here we investigate the structural and functional properties of a TRAF2 construct spanning the trimerization and receptor-binding domains (TRAF2-NC, residues 266-501). According to SAXS data, under physiological conditions, TRAF2-NC preserves a stable trimeric structure with signs of conformational flexibility. Conversely, in a mildly acidic environment (pH 5.7), the protein adopts a less compact and more heterogeneous conformation. In this condition, fluorescence energy transfer measurements reveal an increased membrane-binding propensity in the presence of ganglioside GM1. Together, these results indicate that TRAF2 oligomerization is modulated by pH-dependent conformational changes, suggesting that increased structural flexibility and partial exposure of hydrophobic regions facilitate membrane association under stress conditions, and providing a mechanistic link between structural dynamics and TRAF2 function.

Protein ScienceVol. 35(11)
University of Rome Tor Vergata (IT), Helmholtz Zentrum München (DE), National Research Council (IT)
Openalex Percentile: Top 22%
Protein Structure and Dynamics
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Structural dynamics and pH ‐regulated membrane binding of the TRAF2 ‐ NC trimer — Giampiero Mei, Francesco Bonì, et al. · Protein Science (2026) | TGRS Research Map | TGRS