A Biallelic ITGA10 Variant as a Candidate for Inherited Thrombocytopenia: Insights From a Whole‐Exome Sequencing Cohort

BACKGROUND: Inherited platelet disorders (IPDs) are a heterogeneous group of diseases characterized by thrombocytopenia and/or platelet functional abnormalities. This study aimed to identify novel candidate genes associated with hereditary thrombocytopenia using whole-exome sequencing (WES). METHODS: WES was performed in 40 patients with suspected IPDs. Functional characterization included segregation analysis, platelet-based immunoblotting, and in silico structural modeling. RESULTS: Rare variants in known IPD-associated genes were identified in 32 patients (80%). Reanalysis of unresolved cases identified a novel homozygous ITGA10 (NM_003637.5) variant (c.2248C>T; p.Leu750Phe) in a 5-year-old female with severe thrombocytopenia. ITGA10 encodes the α10 subunit of the α10β1 integrin complex and is located within the recurrent 1q21.1 microdeletion region associated with thrombocytopenia-absent radius syndrome. Immunoblotting studies demonstrated mildly reduced ITGA10 expression, an additional ∼80 kDa ITGA10-related band, markedly reduced ITGB1 expression, and absence of β-actin expression in platelet lysates despite wild-type ACTB and ITGB1 genotypes. In silico structural analysis predicted reduced protein stability and impaired conformational flexibility associated with the p.Leu750Phe substitution. CONCLUSIONS: These findings support ITGA10 as a novel candidate gene for inherited thrombocytopenia and suggest that disruption of the ITGA10-ITGB1 integrin complex may contribute to abnormal platelet homeostasis and cytoskeletal organization. Further functional studies and additional patients will be important to clarify the biological mechanisms and establish the role of ITGA10 in inherited thrombocytopenia.

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Publication Details

Journal
Pediatric Blood & Cancer
Published
2026-10-05
DOI
https://doi.org/10.1002/1545-5017.70733
Primary Topic
Platelet Disorders and Treatments
Type
article
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article

A Biallelic ITGA10 Variant as a Candidate for Inherited Thrombocytopenia: Insights From a Whole‐Exome Sequencing Cohort

Mahdi Shekari, Durdugül Ayyıldız Emecen, Esra Işık, Özkinay Ferda et al.
Pediatric Blood & Cancer
Platelet Disorders and Treatments
article

A Biallelic ITGA10 Variant as a Candidate for Inherited Thrombocytopenia: Insights From a Whole‐Exome Sequencing Cohort

Mahdi Shekari, Durdugül Ayyıldız Emecen, Esra Işık, Özkinay Ferda, Ayça Aslan Kıykım, Zeynep Yıldız Yıldırmak, Tahir Atık, Yeşim Oymak, Özgür Çoğulu, Petek Ballar, Cumhur Gündüz, Veysiye Hülya Üzel, Nihal Karadaş, Yılmaz Ay, Melike Sezgin Evim, Ayşegül Ünüvar, Enise Avcı Durmuşalioğlu, Göklem Üner, Deniz Yılmaz Karapınar, Tiraje Celkan, Ayşe GoncaKaçar
article en

Abstract

BACKGROUND: Inherited platelet disorders (IPDs) are a heterogeneous group of diseases characterized by thrombocytopenia and/or platelet functional abnormalities. This study aimed to identify novel candidate genes associated with hereditary thrombocytopenia using whole-exome sequencing (WES). METHODS: WES was performed in 40 patients with suspected IPDs. Functional characterization included segregation analysis, platelet-based immunoblotting, and in silico structural modeling. RESULTS: Rare variants in known IPD-associated genes were identified in 32 patients (80%). Reanalysis of unresolved cases identified a novel homozygous ITGA10 (NM_003637.5) variant (c.2248C>T; p.Leu750Phe) in a 5-year-old female with severe thrombocytopenia. ITGA10 encodes the α10 subunit of the α10β1 integrin complex and is located within the recurrent 1q21.1 microdeletion region associated with thrombocytopenia-absent radius syndrome. Immunoblotting studies demonstrated mildly reduced ITGA10 expression, an additional ∼80 kDa ITGA10-related band, markedly reduced ITGB1 expression, and absence of β-actin expression in platelet lysates despite wild-type ACTB and ITGB1 genotypes. In silico structural analysis predicted reduced protein stability and impaired conformational flexibility associated with the p.Leu750Phe substitution. CONCLUSIONS: These findings support ITGA10 as a novel candidate gene for inherited thrombocytopenia and suggest that disruption of the ITGA10-ITGB1 integrin complex may contribute to abnormal platelet homeostasis and cytoskeletal organization. Further functional studies and additional patients will be important to clarify the biological mechanisms and establish the role of ITGA10 in inherited thrombocytopenia.

Pediatric Blood & Cancer
Izmir Institute of Technology (TR), Dicle University (TR), Bursa Uludağ Üni̇versi̇tesi̇ (TR), Ege University (TR), Dr. Behçet Uz Çocuk Hastalıkları Hastanesi (TR), Istanbul University-Cerrahpaşa (TR), Istinye University (TR), Sağlık Bilimleri Üniversitesi (TR), Şişli Etfal Eğitim ve Araştırma Hastanesi (TR), Pamukkale University (TR), Istanbul University (TR), University of Health Sciences Antigua (AG)
Openalex Percentile: Top 12%
Platelet Disorders and Treatments
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